| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0012 |
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| Symbol | fadA |
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| ID | 5081487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 15908 |
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| End bp | 17071 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497128 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_001181547 |
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| Protein GI | 146291123 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0898923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAG CTGTTATCGT AGACTGCATT CGTACTCCGA TGGGCCGCTC AAAGGCTGGC
GTATTTCGTA ATGTACGTGC AGAAACTCTG TCTGCCGAAT TGATGAAAGG TCTGTTACTG
CGTAATCCGC AACTCGACCC AAACCTAATT GAAGACGTGA TTTGGGGTTG TGTGCAACAA
ACCCTAGAGC AAGGCTTCAA CATTGCCCGT AATGCTTCAC TATTAGCCGG CATTCCAAAG
ACCGCTGGCG CGGTGACGGT TAACCGCCTA TGTGGTTCAT CAATGGATGC TATCCATCAA
GCGGCGCGTG CGATTATGAC AGGCATGGGC GACACCTTTA TTATCGGTGG CGTAGAACAT
ATGGGCCATG TACCTATGAG CCATGGTGTC GACTTCCACC CAGGTCTTGC TAATAACGTG
GCAAAAGCCT CTGGCATGAT GGGGTTAACT GCTGAAATGC TGGGTAAACT GCACGGTATT
ACCCGTGAAC AGCAAGATGC TTTTGCAGTA CGTTCTCATC AACGCGCTTA TGCAGCCACA
GTTGAAGGCC GCTTTGCTAA GGAAATCTAT GGCATTGAAG GTCACGATGC TAACGGTGCC
TTAATTAAAG TACTGCAAGA CGAAGTGATC CGCCCAGAAA CCACAATGGA ATCTTTGGCT
GCACTGCGTC CGGTATTTGA TCCAGTTAAC GGTACTGTCA CTGCGGGTAC TTCTTCTGCA
CTGTCTGATG GCGCTTCAGC CATGTTGATC ATGGAAGAAT CTAAAGCGCG CGCACTTGGC
TTACCAATTC GTGCACGTAT TCGCTCGATG GCGGTTGCGG GTTGTGATGC GGCGATCATG
GGTTACGGCC CAGTGCCAGC CACGCAAAAA GCGCTGGCTC GTGCTGGTAT CACAGTTGCC
GATTTAGATG TGATTGAACT GAACGAAGCA TTTGCAGCTC AGTCTTTACC TTGTGTAAAA
GATTTAGGCT TAGCGGATGT GGTTGACGAC AAAATCAACC TCAACGGCGG CGCGATTGCA
CTAGGTCACC CACTGGGTTG TTCAGGTGCG CGTATCTCTA CGACGCTGAT CAACTTGATG
GAAGACAAAG ACGCGACCTT AGGTTTAGCG ACCATGTGTA TTGGTTTAGG CCAAGGTATC
GCCACTGTTT TCGAACGCGT TTAA
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| Protein sequence | MKQAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKGLLL RNPQLDPNLI EDVIWGCVQQ
TLEQGFNIAR NASLLAGIPK TAGAVTVNRL CGSSMDAIHQ AARAIMTGMG DTFIIGGVEH
MGHVPMSHGV DFHPGLANNV AKASGMMGLT AEMLGKLHGI TREQQDAFAV RSHQRAYAAT
VEGRFAKEIY GIEGHDANGA LIKVLQDEVI RPETTMESLA ALRPVFDPVN GTVTAGTSSA
LSDGASAMLI MEESKARALG LPIRARIRSM AVAGCDAAIM GYGPVPATQK ALARAGITVA
DLDVIELNEA FAAQSLPCVK DLGLADVVDD KINLNGGAIA LGHPLGCSGA RISTTLINLM
EDKDATLGLA TMCIGLGQGI ATVFERV
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