| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0005 |
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| Symbol | |
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| ID | 5081480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 6568 |
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| End bp | 7614 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640497121 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001181540 |
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| Protein GI | 146291116 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.373694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAAAGT CCATTTTTAA TAAATTATTT AATCTTCGTG AAAATAACCC AATTGAGCGT
CCTAAGAGCT TTAGTGCCAC CGATTTGGGA AAGCCACTAG CAATTTCTCC AAAAAATATC
ACTCAGCAGG AAAGTATTTC TGCTAACGTT GTTTACGTTG ATTTATCTGC ACTTTTTTAT
AGTTTGTTAT TTCCCGCTCG AGTGAATGAT GCTGGTGGAA TTGCCAACAA TCTTGAACGT
CGGGTAATGG CAGAGATAGA GCATGCCTTA GCATCGCCAC AAGTGATCGC CGAAAAAGTG
TTAAAACTGC CGTCAAAGGT ATTGGAGTTA GATCGTAAGC TGGCTGACCC ACAGTTTGAT
ATTAAGGCTC TATTAGCACT TATCGAGCGT GATCCTTTAC TGAGTGTGGA GGTGCTTAAG
CTGTGCAATT CCCCTGCGTT TAAACGTAGC GATAGGGATA TCACCAATTT ACAACAGGCT
TTGGTACAGC TTGGCCGCGA ACAGTTGAGA AAGTTTGTCA CCACTTGTTT AGTGCGTGAA
ATGTTAGATA TCAAACCAAT TTATTTCCGT CGTTTTGGGG CTGAAATTTG GCGCCATTCG
ATGCAGGTCG CTTTTCTTGC CAGTGAGTTA AGCGATGAAG ATCAAGATAC AGCTTTTTTA
TTGGGCCTAT TACACGATGT CGGCAAGTTG GCCATTTTTA AAATGCTCCT CGATGCATTT
GTACAGGCAG AGCCAGGAGA ACAGCCTAAT TCTGGGTTAT TTAGACAAGT TATGACGACG
AAATCGTTAA CCTTGAGTTC ATTGCTTGCT AAGCATTGGC AGTTACCTAA TACCTTTGAA
ACAGAATTAG ACAGGCTCGC CAGTGTGAAC TCGCGTCCTC AAGCGGGGCT TGCTGCAGTG
GTATGGCGGG CGAATGTGAT CAGCGAGATT TCTATGCTGC ATCAAGCAGG GCAATTATCC
CCTGAGATAC TGGCAAATTT ACTGCAGCAA GTTAACTTGG AACAGACCCA ATTTGATGGC
TTACATCAAA AGCTGCTGCA GTTCTGA
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| Protein sequence | MIKSIFNKLF NLRENNPIER PKSFSATDLG KPLAISPKNI TQQESISANV VYVDLSALFY
SLLFPARVND AGGIANNLER RVMAEIEHAL ASPQVIAEKV LKLPSKVLEL DRKLADPQFD
IKALLALIER DPLLSVEVLK LCNSPAFKRS DRDITNLQQA LVQLGREQLR KFVTTCLVRE
MLDIKPIYFR RFGAEIWRHS MQVAFLASEL SDEDQDTAFL LGLLHDVGKL AIFKMLLDAF
VQAEPGEQPN SGLFRQVMTT KSLTLSSLLA KHWQLPNTFE TELDRLASVN SRPQAGLAAV
VWRANVISEI SMLHQAGQLS PEILANLLQQ VNLEQTQFDG LHQKLLQF
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