Gene Sputcn32_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0002 
Symbol 
ID5081515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1553 
End bp2653 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content43% 
IMG OID640497118 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_001181537 
Protein GI146291113 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.90932e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCT CAATTGATAG GGATGCCCTG TTAAAGCCGC TTCAATTAGT CTGTGGTGCG 
GTAGAAAGAC GCCATAATTT GCCCATTTTG TCTAATCTCC TTGTAGAAGT TAGTGGTCAC
TCTCTTAAAT TGACGGGGAC AGATTTAGAA GTTGAACTTG TTGGTCAAGC TGTGGTTCAC
GGTGATATCG AAGAAGGTCG TACAACAGTT CCTGCTAAGA AGCTGTTAGA TATCGTAAAG
TCATTGCCAG AACAAAGCGA ATTAAAGGTT GAGCAACAGG ATAATAAGTG GTTGCTGCGT
TCAGGCCGTA GCCGTTTTTC CTTAGCGACT TTGCCCGCAG AAGAATATCC CAATGTTGAA
GCTTTCCAAG CTGAAATTGA ATTTAGTTTA AAGCAAGGCG TATTGAAGTC GATTATCGAT
TCGACGCAGT TTTCTATGGC GAACCAAGAT GTGCGTTATT ACCTCAATGG ATTACTCTTT
GAAACTGAAG GTAATATGTT GCGCGCTATT GCGACCGATG GTCATCGTTT AGCCTTAAGC
CATCGTGTTA TCGATGCCCA ATTACCTGAA AAACAAGTTA TTGTTCCGCG TAAGGGCGTG
ATGGAAATGG CGCGTTTATT GGAGTCGGAC GATTTAGATA TCGCGATTGC TATCGGTGAT
AATGCGATTC GTGCGACTAC CGCTAACACC GTCTTTACCA GTAAATTAGT GGATGGTCGC
TTCCCTGATT ATCGCCGTGT ATTACCAAAG GGCGGTGATA AAATTGTGAT CGCGAGTCGC
AATCATTTGA AACAAGCACT GACTCGGGCA TCGATTTTAT CCAACGAAAA ATTCCGTGGT
GTGCGTATTC AACTCGAGAA TGGTCTGCTC AAGATTACCG CTAACAATCC TGAACAGGAA
GAAGCGGAAG AGATCATCGA TGTTGACTAT AACAATCAAT CACTTGAAAT TGGTTTTAAC
GTCAGTTATT TACTGGACGT GCTCAATAAC CTTAAGTCCG ATGATGTGCG TATCACGCTG
ATTGATGGTA ACTCTAGCGC TTTAATTGAA AACCATTTGG AAGAAGATTC CATGTATGTG
GTTATGCCGA TGCGTTTGTA G
 
Protein sequence
MKFSIDRDAL LKPLQLVCGA VERRHNLPIL SNLLVEVSGH SLKLTGTDLE VELVGQAVVH 
GDIEEGRTTV PAKKLLDIVK SLPEQSELKV EQQDNKWLLR SGRSRFSLAT LPAEEYPNVE
AFQAEIEFSL KQGVLKSIID STQFSMANQD VRYYLNGLLF ETEGNMLRAI ATDGHRLALS
HRVIDAQLPE KQVIVPRKGV MEMARLLESD DLDIAIAIGD NAIRATTANT VFTSKLVDGR
FPDYRRVLPK GGDKIVIASR NHLKQALTRA SILSNEKFRG VRIQLENGLL KITANNPEQE
EAEEIIDVDY NNQSLEIGFN VSYLLDVLNN LKSDDVRITL IDGNSSALIE NHLEEDSMYV
VMPMRL