Gene Ent638_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_4114 
SymbolrbsC 
ID5110685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp4476788 
End bp4477753 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID640494341 
Productribose ABC transporter permease protein 
Protein accessionYP_001178818 
Protein GI146313744 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.32727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0391743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCC AGGCTGTTTC TGGTCGCCGC TATTTCACTA AGGCATGGCT GTTGGAACAA 
AAATCGCTGA TTGCACTGCT GGTGCTGATT GCGGTGGTTT CGACCATGAG CCCAAACTTT
TTTACCGTTA ATAACCTGTT CAATATTCTC CAGCAGACGT CTGTAAACGC CATTATGGCT
GTCGGGATGA CGCTGGTGAT TTTGACGTCG GGTATCGACC TGTCCGTCGG TTCTCTGCTG
GCACTCACCG GCGCGGTCGC GGCTTCAATT GTAGGGATTG AAGTGAACGC GCTGGTGGCG
ATTGCGGCTG CTCTGGCATT GGGCGCAGCG ATTGGTGCTG TTACCGGAAT GATTGTGGCA
AAAGGCCGGG TGCAGGCATT TATTGCGACT CTGGTGATGA TGCTGCTGCT GCGTGGCGTC
ACGATGGTCT ATACCAACGG CAGTCCCGTG AATACCGGTT TTACTGACAA TGCCGATCTG
TTTGGCTGGT TTGGTATTGG TCGCCCGCTG GGGGTTCCAA CGCCGGTGTG GATCATGGGC
ATCGTCTTCC TGGCCGCATG GTACATGCTG CATCACACCC GTCTCGGTCG TTATATTTAT
GCGCTCGGCG GTAACGAAGC GGCAACGCGC CTGTCAGGCA TCAGCGTTAA CAAAGTGAAG
ATTATCGTTT ATTCCCTTTG CGGCTTGCTG GCGTCGCTGG CGGGTATCAT CGAAGTGGCT
CGTCTCTCCT CGGCACAGCC AACGGCGGGT ACGGGTTATG AGCTGGATGC GATTGCGGCG
GTTGTGCTGG GCGGTACCAG CCTTGCAGGC GGTAAAGGTC GCATTGTTGG GACATTGATC
GGCGCGCTGA TCCTTGGATT CCTGAATAAT GGTTTGAATT TGTTAGGTGT TTCTTCCTAT
TACCAGATGA TCGTTAAAGC AGTGGTGATT TTGCTGGCGG TTCTGGTAGA CAACAAAAAA
CAGTAA
 
Protein sequence
MTTQAVSGRR YFTKAWLLEQ KSLIALLVLI AVVSTMSPNF FTVNNLFNIL QQTSVNAIMA 
VGMTLVILTS GIDLSVGSLL ALTGAVAASI VGIEVNALVA IAAALALGAA IGAVTGMIVA
KGRVQAFIAT LVMMLLLRGV TMVYTNGSPV NTGFTDNADL FGWFGIGRPL GVPTPVWIMG
IVFLAAWYML HHTRLGRYIY ALGGNEAATR LSGISVNKVK IIVYSLCGLL ASLAGIIEVA
RLSSAQPTAG TGYELDAIAA VVLGGTSLAG GKGRIVGTLI GALILGFLNN GLNLLGVSSY
YQMIVKAVVI LLAVLVDNKK Q