| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_4110 |
|---|
| Symbol | |
|---|
| ID | 5110681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 4472442 |
|---|
| End bp | 4473869 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640494337 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001178814 |
|---|
| Protein GI | 146313740 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00236277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0163752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGA AAAAATCACG CAGCATGGCG GGATTGCCAT GGATTGCCGC AATGGCTTTC
TTTATGCAGG CACTGGATGC CACCATTCTG AATACGGCCC TGCCGGCCAT CGCCCAAAGC
CTCAACCGCT CTCCACTGGC CATGCAGTCC GCCATCATTA GCTACACGTT GACCGTCGCG
ATGCTGATCC CTGTTAGCGG CTGGCTGGCA GACCGTTTTG GTACACGTCG GATATTTATG
TTCGCCGTCA CGCTATTTAC GCTCGGCTCA CTGGCGTGCG CACTTTCAAC CTCATTAACG
GAACTAGTAA GCTTTCGTGT ACTTCAGGGT ATAGGCGGCG CAATGATGAT GCCGGTCGCA
CGACTCGCGT TATTACGCGC GTATCCGCGC AGCGAACTCT TGCCCGTACT GAATTTCGTT
ACCATGCCCG GTCTGGTCGG CCCGATTCTC GGCCCGGTGT TGGGTGGCGT ACTGGTGACC
TGGGCGAGCT GGCACTGGAT TTTCCTGATC AACATTCCGA TTGGTATCGC CGGGCTGTGC
TATGCCCGCA AATACATGCC GAATTTCACC ACGCCCAAGC GCAGTTTCGA TATGGGTGGT
TTTTTCCTTT TCGGTGTGAG CCTGGTGTTG TTCTCCATTG GGATGGAGTT ATTCGGCGAG
AAAATCGTCG CGACCTGGAT AGCATTGTCG ATTATCGTCG GCAGCGTTCT GCTTTTCCTT
CTTTATATAC GTCATGCGCG CCGTCATCCA ACGCCACTTA TCTCATTACA GCTTTTTAAA
ACGCGTACTT TCTCCGTCGG AATCGCGGGG AATATCGCCT CACGTCTTGG CACAGGCTGC
GTACCCTTTT TAATGCCGTT GATGTTACAG GTAGGATTTG GCTATCCAGC GCTGATCGCG
GGGATAATGA TGGCACCGAC CGCCGTCGGA TCTATTCTGG CGAAATCGAT GGTAACGAAA
ATACTGCGTG GACTGGGCTA TCGGAAAACG CTGGTTGGAA TAACGGTCTT TATCGGCGCG
ATGATTGCGC AGTTCTCGCT ACAGTCATCG GCACTGCCTG CATGGATGCT GATCCTGCCG
CTCTTTATAT TGGGGATGGC GATGTCTATT CAGTTCACCT CAATGAACAC CATCAGTCTT
GCTGACCTGA CCGATGAAAA TGCCAGTGGC GGTAACAGTG TCCTGGCCGT TACTCAACAG
CTGTCGATCA GTTTAGGCGT GGCCGTGAGC GCAGCGGTAC TTCGCGTTTA TGAAGGTATA
GAAGGCACAA ACACCGTCGA GCAGTTCCAC TACACCTTTA TTACGATGGG CGTCATTACC
GTTGTTTCCG CTCTGGTGTT TTTATTATTG AAACCGAAAG ATGGCCGTAA TCTGATTAAA
GATCGCCACC CGATGAAACC GAACCGCGTT CCATCAGAAC AGGAGTAA
|
|---|
| Protein sequence | MNEKKSRSMA GLPWIAAMAF FMQALDATIL NTALPAIAQS LNRSPLAMQS AIISYTLTVA
MLIPVSGWLA DRFGTRRIFM FAVTLFTLGS LACALSTSLT ELVSFRVLQG IGGAMMMPVA
RLALLRAYPR SELLPVLNFV TMPGLVGPIL GPVLGGVLVT WASWHWIFLI NIPIGIAGLC
YARKYMPNFT TPKRSFDMGG FFLFGVSLVL FSIGMELFGE KIVATWIALS IIVGSVLLFL
LYIRHARRHP TPLISLQLFK TRTFSVGIAG NIASRLGTGC VPFLMPLMLQ VGFGYPALIA
GIMMAPTAVG SILAKSMVTK ILRGLGYRKT LVGITVFIGA MIAQFSLQSS ALPAWMLILP
LFILGMAMSI QFTSMNTISL ADLTDENASG GNSVLAVTQQ LSISLGVAVS AAVLRVYEGI
EGTNTVEQFH YTFITMGVIT VVSALVFLLL KPKDGRNLIK DRHPMKPNRV PSEQE
|
|---|
| |