Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ent638_3983 |
Symbol | dapF |
ID | 5114703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Enterobacter sp. 638 |
Kingdom | Bacteria |
Replicon accession | NC_009436 |
Strand | - |
Start bp | 4316803 |
End bp | 4317627 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640494197 |
Product | diaminopimelate epimerase |
Protein accession | YP_001178689 |
Protein GI | 146313615 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.983346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.2689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCT CTAAAATGCA TGGCCTTGGC AACGATTTTA TGGTCGTCGA CGCGGTAACG CAGAATGTCT TTTTCTCACC AGAGCTGATT CGCCGCCTGG CGGATCGGCA TGTGGGCGTC GGTTTTGATC AACTGCTGGT GGTCGAGCCG CCGTACGATC CGGATCTCGA TTTTCACTAT CGCATCTTTA ATGCTGACGG CAGTGAAGTC TCACAGTGCG GCAACGGCGC GCGCTGTTTC GCCCGCTTTG TGCGTCTGAA AGGCCTGACC AATAAGCGCG ATATCTGCGT GAGCACGGCG AATGGCCGCA TGATATTAAG CGTCACAGAC GATGAGCTGG TGCGCGTGAA CATGGGCGAG CCCAACTTCG AGCCATCAGC CGTACCGTTT CGCGCCATCA AAGCGGAAAA GACCTATATT ATGCGCGCGT CCGAGCAGAC AGTATTGTGC GGCGTCGTCT CGATGGGAAA TCCCCACTGC GTGATTCAGG TTGATGATGT TGATACGGCC GCCGTGGAAA TCCTCGGCCC CATCATGGAA AGCCACGAGC GCTTTCCGGA GCGGGCGAAT ATCGGATTTA TGCAGGTGAT GAAGCGTGAA CACATCCGCC TGCGCGTCTA CGAGCGCGGC GCGGGCGAAA CGCGAGCCTG TGGCAGCGGC GCTTGTGCGG CCGTGGCTGT CGGTATATCG CAAGGTTTAC TGGCAGAAGA GGTTCGCGTG GAATTGCCGG GCGGTCGTCT TGATATCGCC TGGAAAGGTC CGGGTCATCC GCTGTTTATG ACTGGCCCGG CGGCACATGT TTATGACGGG TTTATCCATC TATGA
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Protein sequence | MQFSKMHGLG NDFMVVDAVT QNVFFSPELI RRLADRHVGV GFDQLLVVEP PYDPDLDFHY RIFNADGSEV SQCGNGARCF ARFVRLKGLT NKRDICVSTA NGRMILSVTD DELVRVNMGE PNFEPSAVPF RAIKAEKTYI MRASEQTVLC GVVSMGNPHC VIQVDDVDTA AVEILGPIME SHERFPERAN IGFMQVMKRE HIRLRVYERG AGETRACGSG ACAAVAVGIS QGLLAEEVRV ELPGGRLDIA WKGPGHPLFM TGPAAHVYDG FIHL
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