Gene Ent638_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3979 
SymboluvrD 
ID5114699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp4312243 
End bp4314405 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content58% 
IMG OID640494193 
ProductDNA-dependent helicase II 
Protein accessionYP_001178685 
Protein GI146313611 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01075] DNA helicase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0053327 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTT CTTACCTGCT CGACAGCCTT AATGACAAAC AACGTGAAGC GGTCGCCGCG 
ACGCGGACCA ATATGCTGGT GCTGGCAGGG GCGGGCAGTG GTAAGACGCG TGTTCTGGTT
CACCGCATCG CGTGGTTGCA GAGCGTAGAA AACAGCTCGC CGTATTCCAT TATGGCCGTG
ACGTTTACCA ACAAAGCGGC GGCGGAAATG CGCCATCGTA TTGCCCAGCT GATGGGCACC
AGCCAGGGCG GCATGTGGGT GGGCACGTTC CACGGGCTGG CGCACCGACT GCTGCGTGCG
CACCATATGG ACGCTAATCT GCCACAGGAT TTCCAGATCC TCGACAGCGA AGACCAGCTG
CGTTTGCTGA AACGTCTGAT CAAGGCGATG AACCTCGATG AGAAGCAATG GCCGCCGCGT
CAGGCGATGT GGTACATCAA CGGTCAAAAA GACGAAGGGC TGCGCCCGCA CCATATTCAA
AGCTTCGGCA ATCCGGTTGA GCAAACCTGG CAGAAGGTTT ATCAGGCTTA TCAGGAAGCA
TGCGATCGCG CGGGTCTGGT GGATTTCGCC GAGTTGCTCC TGCGCGCGCA TGAGCTGTGG
CTGAACAAGC CGCATATTCT TCAGCATTAT CGCGAACGCT TTACCAACAT CCTCGTGGAT
GAATTCCAGG ATACCAACAA CATTCAGTAC GCGTGGATCC GCATGCTGGC GGGTGACACC
GGTAAAGTGA TGATCGTGGG CGATGATGAC CAGTCGATTT ACGGCTGGCG TGGTGCGCAG
GTCGAAAACA TTCAGCGCTT CCTCAATGAT TTCCCTGGTG CAGAAACTAT TCGTCTGGAG
CAAAACTACC GCTCGACGAA CAATATTCTG AGCGCCGCCA ACGCCCTGAT TGAAAACAAC
AACGGGCGAC TGGGCAAAAA GCTGTGGACC GACGGCGTCG ACGGCGAACC GATTTCAATC
TACTGCGCGT TCAACGAGTT GGACGAAGCG CGTTTCGTGG TCAATCGCAT CAAAACCTGG
CAGGACAACG GCGGCGCGCT GGAAAAATGC GCCATTCTCT ATCGCAGTAA CGCCCAGTCG
CGCGTGCTCG AAGAGGCGCT GTTGCAGGTC AGCATGCCGT ACCGCATCTA TGGCGGCATG
CGCTTCTTCG AACGCCAGGA AATCAAAGAC GCGCTGTCGT ATTTGCGTCT GATTGCTAAC
CGTAACGACG ATGCGGCGTT TGAGCGTGTC GTGAATACCC CAACGCGTGG AATCGGCGAT
CGCACCCTGG ACGTGGTGCG TCAGGCTGCC CGTGAGCGTC AGCTCACGCT GTGGCAATCG
TGCCGTGAGC TATTGCAGGA AAAAGCCTTG GCCGGGCGCG CAGCAAGCGC GTTACAGCGC
TTTATTGAAC TGATTGACGC CCTGGCACAA GAAACCGCCG ATATGCCGCT GCACGTTCAG
ACGGACCGTG TGGTGAAGGA TTCGGGCCTG CGTATGATGT ATGAGCAGGA AAAGGGCGAA
AAGGGCCAGA CGCGTATCGA GAACTTAGAG GAACTGGTGA CGGCAACGCG TCAGTTCAGC
TACAACGAAG AAGACGAAGA TTTGATGCCG CTGCAGGCAT TCCTCTCCCA CGCGGCGCTG
GAAGCGGGCG AAGGGCAGGC GGATACCTGG CAGGATGCGG TTCAACTGAT GACGCTGCAC
TCCGCCAAAG GGCTGGAGTT CCCGCAAGTG TTTATTGTCG GGATGGAAGA GGGGATGTTC
CCGAGCCAGA TGTCGCTGGA TGAAGGCGGA CGTCTGGAAG AGGAGCGTCG TCTGGCCTAT
GTGGGCGTGA CGCGTGCGAT GGAGAAGCTG ACGCTGACCT ACGCCGAAAC GCGTCGTCTG
TATGGCAAAG AGGTCTATCA CCGTCCGTCT CGCTTTATCG GCGAACTACC GGAAGCCTGC
GTCGAAGAGG TGCGCCTGCG CGCCAGCATC AGCCGTCCGG TTAACCATCA GCGGATGGGA
ACGCCGATCT CGGAAAATGA CACCGGCTAC AAGCTGGGCC AGCGCGTCCG CCATTCGAAA
TTTGGCGAAG GCACCATTGT GAATCTGGAA GGGAGCGGCG AGCACAGTCG CCTGCAGGTG
GCGTTCCAGG GACAGGGTAT CAAATGGCTG GTCGCCGCTT ATGCGCGTCT GGAAAATGTG
TAA
 
Protein sequence
MDVSYLLDSL NDKQREAVAA TRTNMLVLAG AGSGKTRVLV HRIAWLQSVE NSSPYSIMAV 
TFTNKAAAEM RHRIAQLMGT SQGGMWVGTF HGLAHRLLRA HHMDANLPQD FQILDSEDQL
RLLKRLIKAM NLDEKQWPPR QAMWYINGQK DEGLRPHHIQ SFGNPVEQTW QKVYQAYQEA
CDRAGLVDFA ELLLRAHELW LNKPHILQHY RERFTNILVD EFQDTNNIQY AWIRMLAGDT
GKVMIVGDDD QSIYGWRGAQ VENIQRFLND FPGAETIRLE QNYRSTNNIL SAANALIENN
NGRLGKKLWT DGVDGEPISI YCAFNELDEA RFVVNRIKTW QDNGGALEKC AILYRSNAQS
RVLEEALLQV SMPYRIYGGM RFFERQEIKD ALSYLRLIAN RNDDAAFERV VNTPTRGIGD
RTLDVVRQAA RERQLTLWQS CRELLQEKAL AGRAASALQR FIELIDALAQ ETADMPLHVQ
TDRVVKDSGL RMMYEQEKGE KGQTRIENLE ELVTATRQFS YNEEDEDLMP LQAFLSHAAL
EAGEGQADTW QDAVQLMTLH SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY
VGVTRAMEKL TLTYAETRRL YGKEVYHRPS RFIGELPEAC VEEVRLRASI SRPVNHQRMG
TPISENDTGY KLGQRVRHSK FGEGTIVNLE GSGEHSRLQV AFQGQGIKWL VAAYARLENV