| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_3448 |
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| Symbol | tolC |
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| ID | 5110542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | + |
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| Start bp | 3755205 |
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| End bp | 3756689 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640493652 |
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| Product | outer membrane channel protein |
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| Protein accession | YP_001178158 |
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| Protein GI | 146313084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.203909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TGCTCCCCAT CCTTATCGGC CTGAGCCTGA CGGGCTTCAG CGCGATGAGC
CAGGCAGAAA ACCTATTACA GGTTTATCAG CAAGCACGTC TGGGCAACCC TGAGCTGCGT
AAGTCGGCTG CCGATCGTGA TGCTGCGTTC GAAAAAATTA ACGAAGCACG CAGCCCGTTG
CTGCCGCAGT TGGGCTTAGG TGCCGATTAT ACCTACGGCA ATGGCTTCCG TGATAGCAAC
GGTGTTAACT CCAATACCAC CGGCGCATCT CTGCAATTAA CGCAAACCTT GTTTGATATG
TCCAAGTGGC GTTCGCTGAG TCTTCAAGAG AAAAGCGCGG GCATTCAGGA CGTCACCTAT
CAGACCGATC AGCAAACGCT GATCCTGAAT ACCGCGACGG CCTACTTCAA CGTGTTGAGC
GCGATCGATT CGCTCTCCTA CACCGAAGCG CAGAAACAAG CGATTTATCG TCAGTTGGAT
CAAACCACGC AACGTTTTAA CGTAGGCCTG GTGGCGATCA CCGACGTGCA GAACGCCCGT
TCCCAATACG ATACCGTGCT GGCGAACGAA GTGACCGCGC GTAACAACCT TGATAACGCG
CTGGAATCTC TGCGTCAGGT CACTGGTAAT TACTATCCTG AACTGGCTTC GTTGAACGTC
GACAACTTCA AAACGGATAA ACCGCAGGCC GTGAATGCGC TGCTGAAAGA AGCAGAAAAC
CGCAACCTGG CGCTGTTACA GGCACGTCTA AGCCAGGATC TGGCTCGCGA GCAAATCCGT
CAGGCGCAGG ATGGGCATCT GCCAACCCTG AGCCTCACGG CATCGAGTGC AGTAACGGAC
ACCTCTTATA GCGGTTCTAA AACCGGCGGC GCGAATGCTT CGCAGTTTGA CGACAGCAAT
GTGGGCCAGA ACAAAGTCGG CCTGAGCTTC TCCATGCCGT TGTATCAAGG CGGTATGGTT
AACTCTCAGG TTAAACAAGC TCAGTACAAC TTTGTTGGCG CAAGCGAACA GCTTGAAAGC
GCGCACCGCA ACGTAGTGCA GACCGTGCGT TCGTCATTCA ACAACGTGAA TGCCTCTATC
AGCAGCATCA ACGCCTACAA ACAGGCCGTT GTGTCGGCGC AGAGTTCATT GGACGCGATG
GAAGCCGGTT ATTCGGTCGG TACGCGTACC ATCGTTGACG TGCTGGATGC GACCACCACG
CTGTTTAACG CAAAACAACA GCTCTCCAGC GCGCGCTACA ACTACCTGAT TAACCAGCTG
AATATTAAAT CAGCTCTGGG TACGCTGAAT GAGCAGGATC TGCAGATGCT GAACAGCACA
CTGGGTAAAC CGGTTTCAAC AACGCCTGAA AATGTGGCGC CGGAAAACCC ACAGCAGGAC
GCCAGCGCTG ATGGCTATAA CGCCAACGAT TCAGCCCCTG CTGCGCAGCC CGCAGCGGCT
CGCACGACAA CCAATAACGC AGCCGGTAAC CCATTCCGTA ACTGA
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| Protein sequence | MKKLLPILIG LSLTGFSAMS QAENLLQVYQ QARLGNPELR KSAADRDAAF EKINEARSPL
LPQLGLGADY TYGNGFRDSN GVNSNTTGAS LQLTQTLFDM SKWRSLSLQE KSAGIQDVTY
QTDQQTLILN TATAYFNVLS AIDSLSYTEA QKQAIYRQLD QTTQRFNVGL VAITDVQNAR
SQYDTVLANE VTARNNLDNA LESLRQVTGN YYPELASLNV DNFKTDKPQA VNALLKEAEN
RNLALLQARL SQDLAREQIR QAQDGHLPTL SLTASSAVTD TSYSGSKTGG ANASQFDDSN
VGQNKVGLSF SMPLYQGGMV NSQVKQAQYN FVGASEQLES AHRNVVQTVR SSFNNVNASI
SSINAYKQAV VSAQSSLDAM EAGYSVGTRT IVDVLDATTT LFNAKQQLSS ARYNYLINQL
NIKSALGTLN EQDLQMLNST LGKPVSTTPE NVAPENPQQD ASADGYNAND SAPAAQPAAA
RTTTNNAAGN PFRN
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