Gene Ent638_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3063 
Symbol 
ID5112598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp3332746 
End bp3334074 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content52% 
IMG OID640493257 
ProductATP-dependent RNA helicase SrmB 
Protein accessionYP_001177778 
Protein GI146312704 
COG category[L] Replication, recombination and repair
[J] Translation, ribosomal structure and biogenesis
[K] Transcription 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.124776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.84662e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGTAA CGACTTTTTC CGAACTTGAA CTCGATGAAT GCCTGCTGGA AGCTCTCCAG 
AATAAAGGCT TCACACGCCC GACTGCCATC CAGGCGGCTG CCATTCCGCC TGCGTTAGAA
GGCCGTGATG TACTCGGTTC TGCGCCGACA GGCACCGGTA AAACGGCGGC GTACTTGCTG
CCTGTCTTGC AGCATCTTAT TGATTTCCCT CGCAAGAAAT CTGGCCCGCC GCGTATTTTG
ATTCTGACAC CTACACGTGA GTTAGCCGTT CAGGTAGCAG AACATGCGCG TGAATTAGCC
GCAAAAACGC ATCTGGACAT TGCCACCATC ACCGGTGGTG TCGCCTACAT GAACCACGCC
GAAGTGTTCA GTGAGAACCA GGATATCGTG GTAGCGACGA CCGGCCGTTT GATGCAATAC
ATCAAAGAAG AGAACTTTGA CTGCCGCGCA GTAGAAACGC TGATCCTTGA TGAAGCAGAC
CGTATGCTGG AACTGGGCTT TGCGCAGGAT ATCGAGCATA TCGCAGGCGA AACGCGCTGG
CGCAAACAGA CGATGCTGTT CTCCGCAACG CTTGAAGGCG ATGCGATCAA AGATTTTGCT
GAGCGTCTTC TGGAAGATCC GGCCGAAGTT TCTGCCACGC CTTCTACGCG TGAGCGCAAA
AAGATCCACC AGTGGTATTA CCGCGCAGAT AACTTTGAAC ACAAGCTTGA GCTGCTGAAG
CATCTGCTCA AACAAGATGA CACGACGCGT ACCATTGTTT TTGTTCGTAA ACGCGAGCGC
GTACATGAGT TGGCCGCTCA GTTGCGTTCA GCGGGTATCG ATAACTGTTA TCTTGAAGGC
GACATGCCGC AGGTGAAACG CACCGAAGGG ATTAAACGTC TGACTGAGGG TCGCGTTAAT
GTTCTGGTGG CTACCGACGT AGCGGCGCGC GGTATCGACA TTCCTGAAGT AAGCCATGTT
ATTAACTTTG ACATGCCGCG CAGCGGGGAT ACCTATCTTC ACCGTATCGG TCGTACCGGA
CGTGCAGGCC TGAAGGGTAC GGCTATTTCT TTGGTTGAGG CGCATGACTA TCTGCTGCTT
CAGAAAGTAG GCCGTTACAT CGAAGAGCCC GTTAAAGCGC GCGTAATTGA TGAGTTACGC
CCTACGACGC GTCCGCCGAG CGAGAAAATG ACGGGTAAAC CGTCTAAGAA AGTGCTCGCT
AAACGCGAAG AGCAGAAACA GAAAGAAAAA GAAAAACCGC GCGTGAAGGA CCGTCACCGT
GATGCCAAGA ATATTGGCAA ACGCCGTAAG CCGAGTGGCT CAACAGCGAC TTCTAACAAA
GAAGAATAA
 
Protein sequence
MTVTTFSELE LDECLLEALQ NKGFTRPTAI QAAAIPPALE GRDVLGSAPT GTGKTAAYLL 
PVLQHLIDFP RKKSGPPRIL ILTPTRELAV QVAEHARELA AKTHLDIATI TGGVAYMNHA
EVFSENQDIV VATTGRLMQY IKEENFDCRA VETLILDEAD RMLELGFAQD IEHIAGETRW
RKQTMLFSAT LEGDAIKDFA ERLLEDPAEV SATPSTRERK KIHQWYYRAD NFEHKLELLK
HLLKQDDTTR TIVFVRKRER VHELAAQLRS AGIDNCYLEG DMPQVKRTEG IKRLTEGRVN
VLVATDVAAR GIDIPEVSHV INFDMPRSGD TYLHRIGRTG RAGLKGTAIS LVEAHDYLLL
QKVGRYIEEP VKARVIDELR PTTRPPSEKM TGKPSKKVLA KREEQKQKEK EKPRVKDRHR
DAKNIGKRRK PSGSTATSNK EE