Gene Ent638_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_2967 
Symbol 
ID5112503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp3223746 
End bp3224873 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content56% 
IMG OID640493161 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_001177682 
Protein GI146312608 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.546622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGCC CGGTCATTGA GCTGACTCAG CAGCTTATTC GCCGCCCTTC CCTTAGCCCG 
GACGATGCAG GTTGTCAGGC TTTAATGATT GAACGTCTGC GCGCGATCGG TTTTACCGTT
GAGCGGATGG ATTTTGGCGA CACCCAGAAC TTTTGGGCAT GGCGCGGCCA GGGTGAAACC
CTCGCTTTTG CCGGACATAC TGACGTTGTC CCGGCAGGCG ATGCTGACCG CTGGATCAAT
CCTCCGTTTG AACCGACGAT TCGTGACGGC ATGCTGTTTG GTCGCGGTGC GGCTGACATG
AAAGGCTCGC TGGCTGCGAT GGTGGTGGCC GCCGAACGTT TCGTCGCCCA GCATCCAAAC
CACAAAAACC GTCTTGCATT CCTGATCACG TCCGATGAAG AAGCCAGCGC CAAAAATGGC
ACGGTGAGAG TCGTTGAAAC GCTGATGGAA CGCCACGAAC GCCTGGATTA TTGTCTGGTA
GGCGAACCGT CCAGCACCGA AGTCGTGGGC GATGTGGTGA AAAATGGCCG TCGCGGCTCG
CTAACCTGCA ACCTGACGAT TCACGGTGTG CAAGGCCACG TCGCGTATCC GCATCTTGCC
GATAACCCGG TGCATCGCGC TGCGCCCATG CTGAATGAGC TGGTTAATAT CGAATGGGAT
AAAGGCAACG AATTCTTCCC GCCGACCAGC ATGCAGATTG CAAATCTTCA GGCGGGTACG
GGCAGCAACA ACGTGATCCC CGGTGATTTC TCCGTACAGT TCAACTTCCG TTTCAGCACG
GAATTGACCG ACGAAATGAT TAAAAGCCGC GTCGTCGCTC TACTGGAAAA ATACGAATTG
CGCTATTCCG TGGACTGGTG GCTGTCGGGC CAGCCGTTCC TGACCCAGCG CGGCAAGCTG
GTCGATGCGG TGGTTAACGC CATCGCGCAC TATAATGAAA TTAAACCGCA ACTGCTGACA
ACGGGCGGCA CATCAGACGG ACGCTTTATC GCCCGTATGG GTGCGCAGGT TGTCGAACTG
GGACCAGTGA ACGCCACCAT TCATAAAATC AATGAATGCG TGAATGCGGC TGATTTGCAG
CTACTGGCGC GTATGTATCA ACGTATCATG GAGCAACTCG TCGCCTGA
 
Protein sequence
MSCPVIELTQ QLIRRPSLSP DDAGCQALMI ERLRAIGFTV ERMDFGDTQN FWAWRGQGET 
LAFAGHTDVV PAGDADRWIN PPFEPTIRDG MLFGRGAADM KGSLAAMVVA AERFVAQHPN
HKNRLAFLIT SDEEASAKNG TVRVVETLME RHERLDYCLV GEPSSTEVVG DVVKNGRRGS
LTCNLTIHGV QGHVAYPHLA DNPVHRAAPM LNELVNIEWD KGNEFFPPTS MQIANLQAGT
GSNNVIPGDF SVQFNFRFST ELTDEMIKSR VVALLEKYEL RYSVDWWLSG QPFLTQRGKL
VDAVVNAIAH YNEIKPQLLT TGGTSDGRFI ARMGAQVVEL GPVNATIHKI NECVNAADLQ
LLARMYQRIM EQLVA