| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_1818 |
|---|
| Symbol | rnfD |
|---|
| ID | 5113341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | - |
|---|
| Start bp | 1974173 |
|---|
| End bp | 1975225 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640492009 |
|---|
| Product | electron transport complex protein RnfD |
|---|
| Protein accession | YP_001176548 |
|---|
| Protein GI | 146311474 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.452065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000391515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTCA GAATCGCAAG CTCCCCCTAC ACCCATAACC AGCGCCAGAC ATCACGCATC
ATGATGCTGG TCTGCCTGGC CGCATTGCCA GGCATTGCCG TTCAGTTCTG GTTTTTTGGC
TGGGGGACGC TGTTTCAAAT TATTCTCGGT TGTGTCAGTG CACTCGGGGC AGAAGCGCTT
GTTCTGAAGC TGCGCAAAAT GCCGGTCTCG CGCATTCTTG CGGACAACTC CGCATTGCTG
ACGGGCTTGT TGCTGGCGAT CAGTATTCCG CCCTTCGCAC CGTGGTGGAT GGTGGTCCTG
GGCACAGTAT TTGCCGTCAT TATCGCAAAA CAGTTGTACG GTGGTCTTGG GCATAACCCG
TTCAACCCGG CCATGATCGG ATATGTGGTG CTACTTATCT CTTTCCCGGT GCAAATGACC
AGTTGGTTAC CGCCGCAGGA GATTGCCGCG ACCGTGCCTG GCTTGATGGA TGCGCTGCAG
GTGATCTTTA CCGGGCACAC CGCCACGGGG GGTGACATGG CCACGCTGAG AATGGGCGTA
GACGGTATCA GCCAGGCCAC GCCGCTCGAC ACCTTTAAAA CCTCGCTGCA TGCCGGTCAC
AGCGTCGATC AGATCATGCA ATACCCTATC TATAGCGGCG TTCTGGCCGG GGCGGGCTGG
CAGTGGGTCA ACCTGGCGTA TCTGCTCGGT GGGATATTCC TCCTGCGGAA CAAAGCGATT
CGCTGGCATA TTCCGGTGAG CTTCCTGGCG ACACTGGCGT TCTGCTCAAC GCTGGGTTGG
ATCTTTTCGC CTGAATCAAT GGCAAGCCCG GAGATTCATC TGCTCTCTGG TGCGACGATG
CTAGGCGCAT TCTTTATTTT GACCGACCCT GTCACAGCCT CCACCACTAA CCGTGGGCGT
CTCATCTTTG GCGTACTGGC TGGCCTGCTG GTCTGGTTGA TTCGCAGTTT CGGGGGGTAT
CCGGATGGCG TTGCGTTTGC TGTTTTGCTG GCCAACATCA CCGTGCCGTT AATCGATTAC
TACACGCGTC CTCGCGTGTA CGGCCACCGT TAA
|
|---|
| Protein sequence | MVFRIASSPY THNQRQTSRI MMLVCLAALP GIAVQFWFFG WGTLFQIILG CVSALGAEAL
VLKLRKMPVS RILADNSALL TGLLLAISIP PFAPWWMVVL GTVFAVIIAK QLYGGLGHNP
FNPAMIGYVV LLISFPVQMT SWLPPQEIAA TVPGLMDALQ VIFTGHTATG GDMATLRMGV
DGISQATPLD TFKTSLHAGH SVDQIMQYPI YSGVLAGAGW QWVNLAYLLG GIFLLRNKAI
RWHIPVSFLA TLAFCSTLGW IFSPESMASP EIHLLSGATM LGAFFILTDP VTASTTNRGR
LIFGVLAGLL VWLIRSFGGY PDGVAFAVLL ANITVPLIDY YTRPRVYGHR
|
|---|
| |