| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_1646 |
|---|
| Symbol | mnmA |
|---|
| ID | 5112298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | - |
|---|
| Start bp | 1800907 |
|---|
| End bp | 1802016 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640491835 |
|---|
| Product | tRNA-specific 2-thiouridylase MnmA |
|---|
| Protein accession | YP_001176376 |
|---|
| Protein GI | 146311302 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.306942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAA GCCCAAAAAA AGTGATCGTC GGCATGTCCG GCGGTGTCGA CTCCTCCGTT
TCTGCCTGGC TGTTGCAACA ACAGGGCTAT CAGGTCGAAG GCCTGTTCAT GAAGAACTGG
GAAGAAGATG ACGGCGAGGA ATACTGTACA GCAGCTGCGG ATCTCGCCGA TGCGCAGGCC
GTGTGCGACA AACTCGGCAT TGAACTGCAC ACCGTCAACT TTGCGGCGGA ATACTGGGAC
AACGTCTTTG AACTGTTCCT GGAAGAGTAC AAAGCAGGCC GCACGCCGAA CCCGGATATT
CTGTGCAACA AAGAGATCAA ATTTAAAGCC TTCCTTGAAT TCGCCGCGGA AGATCTGGGC
GCTGACTTTA TCGCGACCGG TCACTACGTG CGTCGTGCAG ACGTTGATGG CAAAAGCCAA
CTCCTGCGCG GTCTCGACGG CAACAAAGAT CAGAGCTACT TCCTTTATAC GCTCGGCCAT
GACCAAATTG TGCAAAGCCT GTTCCCGGTC GGTGAACTCG AAAAACCTGA AGTTCGCAAA
ATCGCCGAAA ACCTTGATCT GATTACCGCG AAGAAAAAAG ACTCAACCGG CATCTGCTTT
ATTGGTGAGC GCAAATTCCG CGAATTCCTG GGGCGTTACC TGCCGGCTCA ACCGGGCAAA
ATCATCACCG TGGATGGCGA TGATGTGGGT GAACACCAGG GCCTGATGTA TCACACGCTC
GGACAGCGCA AAGGTCTGGG TATTGGCGGT ACAAAAGAAG GCAGCGAAGA GCCATGGTAC
GTTGTCGACA AAGACGTTGA GAACAATATT CTCGTTGTTG CCCAGGGTCA CGAACATCCG
CGCCTCATGT CTGTCGGTCT TATCGCCCAG CAGTTGCACT GGGTGGATCG CGAGCCGTTT
ACCGGTACGC TGCGTTGCAC AGTCAAAACC CGTTATCGCC AGACCGATAT TCCCTGCACC
GTGACGGCAC TGGATGAAGA ACGCGTTGAG GTTCGTTTCG ACGAGCCGGT TTCTGCCGTG
ACGCCAGGCC AGTCAGCCGT TTTCTACAGC GGTGAAATCT GTCTGGGCGG CGGTATCATT
GAACAGCGCC TGCCTCTGGC AGCGGTGTAA
|
|---|
| Protein sequence | MSASPKKVIV GMSGGVDSSV SAWLLQQQGY QVEGLFMKNW EEDDGEEYCT AAADLADAQA
VCDKLGIELH TVNFAAEYWD NVFELFLEEY KAGRTPNPDI LCNKEIKFKA FLEFAAEDLG
ADFIATGHYV RRADVDGKSQ LLRGLDGNKD QSYFLYTLGH DQIVQSLFPV GELEKPEVRK
IAENLDLITA KKKDSTGICF IGERKFREFL GRYLPAQPGK IITVDGDDVG EHQGLMYHTL
GQRKGLGIGG TKEGSEEPWY VVDKDVENNI LVVAQGHEHP RLMSVGLIAQ QLHWVDREPF
TGTLRCTVKT RYRQTDIPCT VTALDEERVE VRFDEPVSAV TPGQSAVFYS GEICLGGGII
EQRLPLAAV
|
|---|
| |