| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_1629 |
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| Symbol | |
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| ID | 5112074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | - |
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| Start bp | 1780128 |
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| End bp | 1783574 |
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| Gene Length | 3447 bp |
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| Protein Length | 1148 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640491818 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001176359 |
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| Protein GI | 146311285 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.027535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC AATATCGTTA TTCCTTGCCC GGCAAAGCGG GCGACCAACG TCAGCTAGGT
GAACTGACGG GTGCAGCCTG CGCCACGCTT GTGGCGGAGA TCGCTGAGCG CCATGCGGGT
CCGGTGGTCC TGGTAGCCCC GGATATGCAA AACGCATTGC GTCTGCACGA CGAAATTCGC
CAGTTTACCG ACAGTCTGGT CTTTAACCTG GCCGACTGGG AAACGCTGCC GTACGACAGC
TTCTCCCCGC ACCAGGAGAT CATCTCCTCG CGCCTGTCGA CTCTGTATCA GTTGCCGACC
ATGCAGCGCG GCGTATTGAT TGTCCCAGTG AATACGTTGA TGCAGCGCGT GTGTCCGCAC
AGCTATCTGC ACGGTCACGC GCTGGTGATG AAAAAAGGTG AACGGTTATC GCGCGACGCC
CTGCGTTCGC AGCTTGATAG CGCCGGTTAT CGCCATGTCG ATCAGGTGAT GGAGCACGGC
GAATACGCCA CGCGCGGTGC GCTGTTGGAT CTGTATCCGA TGGGCAGTGA CCAGCCGTAT
CGCCTGGATT TCTTCGACGA TGAAATCGAC AGTCTGCGCG TGTTTGACGC CGATACCCAG
CGCACGCTGG AGGAAGTCGA TGCCATCAAT TTACTGCCTG CGCATGAATT CCCAACGGAT
AAAACCGCCA TCGAGTTGTT CCGCAGCCAG TGGCGCGACA AGTTTGATGT GAAGCGCGAC
GCCGAACATA TTTACCAGCA GGTGAGCAAA GGCACGCTGC CTGCGGGGAT TGAATACTGG
CAGCCGCTGT TCTTTAGCGA GCCACTTCCC GCGCTGTTCA GCTATTTCCC GGCGAAAACG
CTGATTGTGA ACACCGGCGA TCTGGAATCC AGTGCAACCC GTTTTGAAAA CGAAACCCGT
GCGCGATTCG AAAACCGTGG CGTTGATCCG ATGCGCCCCC TGCTGCCACC GGAACAGCTT
TGGCTACGCA CCGACGCGCT GTTTTCAGAA CTCAAAAAAT GGCCGCGCGT GCAGCTCAAA
ACGGAAAATC TGCCTGAGAA AGCCGCCAAT ACCAATCTCG GATTCGAGAA ACTGCCCGAT
CTTTCCGTTC AGGCGCAGCA AAAATCGCCG CTGGATAATC TGCGCAAGTT CCTGGAATCC
TTCACCGGTC CGGTGATTTT CTCGGTCGAG AGTGAAGGCC GCCGTGAAGC GCTGGGCGAA
CTGCTCGCGC GAATCAAAGT GTCGCCAAAA CGCATTTTAC GCCTCGACGA AGCGACCGAT
GCCGGGCGCT ACCTGATGAT TGGTGCGGCT GAGCATGGAT TCATCGACAC GCTGAATAAT
CGCGCGCTGA TTTGTGAAAG CGATCTGCTC GGCGAGCGCG TGGCGCGCCG TCGTCAGGAC
AGCCGTCGCA CCATTAACCC GGATACGCTG ATTCGCAACC TGGCGGAGCT GCACGTGGGC
CAGCCGATCG TGCATCTCGA GCACGGCGTG GGGCGTTACG CGGGAATGAC CACGCTGGAA
ACGGGCGGCA TTAAGGGCGA ATACCTGATG CTCACCTATT CCGGCGATGC CAAACTCTAC
GTTCCGGTGT CTTCGCTGCA TCTGATTAGC CGTTATGCGG GTGGTGCAGA AGATAACGCC
CCGCTGCACA GGCTGGGCGG TGATGTCTGG GCGCGCGCGC GTCAGAAAGC CGCCGAAAAA
GTCCGCGATG TGGCGGCAGA ATTGCTGGAT ATTTACGCCC AGCGTGCCGC GAAATCAGGC
TACGCGTTCA AGCACGACAA GGAACAATAT CAATTGTTCT GCGACAGTTT CCCGTTTGAA
ACCACGCCCG ATCAGGCGCA GGCGATAAAC GCCGTGCTAA GCGACATGTG CCAGCCGCTG
GCGATGGATC GCCTGGTGTG CGGTGACGTG GGCTTTGGTA AAACCGAAGT CGCGATGCGC
GCCACCTTCC TGGCGGTCGA AAATAACAAG CAGGTCGCCG TGCTGGTGCC GACCACGCTG
CTCGCCCAGC AGCACTACGA CAACTTCCGC GATCGCTTCG CCAACTGGCC GGTGCGGATC
GAGATGCTGT CGCGTTTTCG CAGTGCCAAA GAGCAAACAC AGATCCTGGA ACAGGCCCGC
GAAGGCAAAA TCGATATCCT GATCGGCACC CATAAATTGC TGCAAAGCGA CGTGAAGTGG
AAAGATTTGG GCCTGCTGAT CGTCGATGAA GAGCACCGCT TCGGCGTACG CCACAAAGAG
CGCATCAAAG CGATGCGCGC GGACGTGGAT ATTCTGACCC TCACCGCGAC GCCGATCCCG
CGTACCCTGA ATATGGCGAT GAGCGGCATG CGCGATCTGT CGATCATTGC CACGCCACCG
GCGCGTCGTC TGGCGGTGAA AACGTTTGTC CGCGAGTACG ATAGCCTGGT GGTTCGCGAA
GCAATCCTGC GTGAAGTGCT GCGTGGCGGG CAGGTTTATT ATCTCTTTAA CGATGTCGAA
AACATTCAGA AAACCGCCGA TAAACTGGCT GAACTGGTGC CAGAGGCCCG CATTGCCATC
GGTCATGGGC AGATGCGCGA GCGCGAGCTG GAACGGGTGA TGAACGATTT CCACCACCAG
CGTTTTAACG TGCTGGTGTG TACCACGATT ATTGAAACCG GTATCGACAT TCCGACGGCG
AACACCATCG TTATTGAACG TGCGGATCAC TTCGGTCTGG CGCAGCTTCA TCAGTTGCGC
GGTCGCGTTG GGCGCTCGCA TCATCAGGCT TACGCATGGC TGATGACGCC GCATCCGAAA
GCGATGACCA CCGACGCGCA AAAACGTCTT GAAGCCATCG CCTCGCTGGA AGATTTGGGG
GCAGGTTTCG CGCTGGCGAC ACACGATCTC GAGATTCGTG GCGCTGGCGA ATTGCTGGGT
GAAGATCAGA GCGGGTCCAT GGAAACCATC GGTTTCTCGT TGTACATGGA GCTACTGGAA
AATGCTGTTG ATGCGTTGAA AGCTGGGCGC GAGCCGTCGC TTGAGGATCT CACCAGCCAG
CAAACGGAGG TCGAACTGCG CATGCCGTCC CTGTTGCCTG ATGATTTTAT CCCGGACGTG
AACACGCGCC TGTCGTTCTA TAAGCGAATT GCCAGCGCCA AAAAAGAATC TGAGCTTGAA
GAAATCAAGG TTGAGCTCAT TGACCGCTTT GGTTTGCTGC CGGATCCGGC GCGTAACCTG
CTCGACATCG CCCGACTGCG TCAGCAGGCG CAGAAGCTGG GTATCCGCAA GCTTGAAGGG
AATGAGAAAG GCGGGACGGT TGAATTTGCT GAGAAAAACC ATGTCGATCC GATGTGGCTG
ATCGGTTTGT TGCAGAAGCA ACCACAGCAT TTCCGCCTGG ATGGCCCGAC GCGTCTGAAG
TTTACGCAGG AACTGGCCGA CCGGAAAACC CGCATGGAAT GGGTGCGCAA CTTTATGCGT
CAACTGGAAG AAAACACGGT AGCGTAG
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| Protein sequence | MPEQYRYSLP GKAGDQRQLG ELTGAACATL VAEIAERHAG PVVLVAPDMQ NALRLHDEIR
QFTDSLVFNL ADWETLPYDS FSPHQEIISS RLSTLYQLPT MQRGVLIVPV NTLMQRVCPH
SYLHGHALVM KKGERLSRDA LRSQLDSAGY RHVDQVMEHG EYATRGALLD LYPMGSDQPY
RLDFFDDEID SLRVFDADTQ RTLEEVDAIN LLPAHEFPTD KTAIELFRSQ WRDKFDVKRD
AEHIYQQVSK GTLPAGIEYW QPLFFSEPLP ALFSYFPAKT LIVNTGDLES SATRFENETR
ARFENRGVDP MRPLLPPEQL WLRTDALFSE LKKWPRVQLK TENLPEKAAN TNLGFEKLPD
LSVQAQQKSP LDNLRKFLES FTGPVIFSVE SEGRREALGE LLARIKVSPK RILRLDEATD
AGRYLMIGAA EHGFIDTLNN RALICESDLL GERVARRRQD SRRTINPDTL IRNLAELHVG
QPIVHLEHGV GRYAGMTTLE TGGIKGEYLM LTYSGDAKLY VPVSSLHLIS RYAGGAEDNA
PLHRLGGDVW ARARQKAAEK VRDVAAELLD IYAQRAAKSG YAFKHDKEQY QLFCDSFPFE
TTPDQAQAIN AVLSDMCQPL AMDRLVCGDV GFGKTEVAMR ATFLAVENNK QVAVLVPTTL
LAQQHYDNFR DRFANWPVRI EMLSRFRSAK EQTQILEQAR EGKIDILIGT HKLLQSDVKW
KDLGLLIVDE EHRFGVRHKE RIKAMRADVD ILTLTATPIP RTLNMAMSGM RDLSIIATPP
ARRLAVKTFV REYDSLVVRE AILREVLRGG QVYYLFNDVE NIQKTADKLA ELVPEARIAI
GHGQMREREL ERVMNDFHHQ RFNVLVCTTI IETGIDIPTA NTIVIERADH FGLAQLHQLR
GRVGRSHHQA YAWLMTPHPK AMTTDAQKRL EAIASLEDLG AGFALATHDL EIRGAGELLG
EDQSGSMETI GFSLYMELLE NAVDALKAGR EPSLEDLTSQ QTEVELRMPS LLPDDFIPDV
NTRLSFYKRI ASAKKESELE EIKVELIDRF GLLPDPARNL LDIARLRQQA QKLGIRKLEG
NEKGGTVEFA EKNHVDPMWL IGLLQKQPQH FRLDGPTRLK FTQELADRKT RMEWVRNFMR
QLEENTVA
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