Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ent638_0877 |
Symbol | secD |
ID | 5111066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Enterobacter sp. 638 |
Kingdom | Bacteria |
Replicon accession | NC_009436 |
Strand | + |
Start bp | 977053 |
End bp | 978900 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640491053 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_001175612 |
Protein GI | 146310538 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAAACC GTTATCCTTT GTGGAAGTAC ATCATGCTGG TCGTCGTGAT TATCGTCGGC CTGCTGTACG CGCTTCCCAA CCTGTATGGT GAGGATCCGG CTGTTCAAAT CACTGGCGCG CGCGGTGTCG CCGCCAGTGA GCAAACGCTG ATCCAGGTCC AGAACACTTT ACAACAAGAA AAAATTACCG CTAAGTCTGT GGCACTGGAA GAGGGCGCTA TTCTTGCTCG CTTCGACACC ACCGACACGC AGCTCCGCGC CCGTGAAGCG CTGGTGAGCG TGCTGGGTGA TAAATATGTC GTGGCGTTGA ACCTTGCTCC TGCAACCCCG CGTTGGTTAG CCTCTATCAA TGCAGAGCCG ATGAAACTCG GTCTTGATCT GCGTGGTGGC GTTCACTTCC TGATGGAAGT GGATATGGAT ACTGCGCTTG GCAAACTGCA GGAACAGAAT ATGGACGGCC TGCGCAGCGA TCTGCGCGAA AAAGGCATTC CTTACACCAC CGTGCGTAAG GAAGATAACT ACGGAATGAG CATCACTTTC CGTGATGCTG CCGCTCGCGA TCAGGCAGTG GATTATCTCT CTACGCGTCA CCGCGATCTG GTGATTTCAC GTCAGGGTAG CAACCAGCTG CGTGCCGTGA TGACCGATGC CCGTCTGAGC GAAGCGCGTG AATATGCGGT ACAGCAGAAC ATCAATATCC TGCGTAACCG TGTAAACCAG CTTGGTGTTG CTGAGCCGCT GGTACAGCGC CAGGGTTCAG ACCGTATCGT GGTAGAACTG CCGGGTATCC AGGACACTGC GCGCGCCAAA GAAATTTTGG GTGCGACAGC GACACTGGAA TTCCGTCTGG TGAACACTAA TGTGGACCAA TCTGCCGCGG CGTCTGGTCG TGTGCCTGGT GATTCCGAAG TGAAAGAAAC GCGTGAAGGT CAGCCTGTTG TGCTGTACAA GCGTGTTATT CTCACCGGTG ACCACATTAC TGACTCCACG TCTAATCAGG ACGAATACAA CCAGCCGCAG GTTAACATCT CGCTTGATAG CGCCGGTGGT AACATCATGT CGAACTTCAC CAAGGATAAC ATCGGTAAAC CGATGGCGAC CTTGTTCGTG GAGTACAAAG ACAGCGGTAA GAAAGATGCT AATGGTCGTG CAATCCTGGT GAAAGAGGAA GAGGTGATCA ACGTCGCCAA TATCCAGTCT CGCCTGGGTA ACAGCTTCCG TATTACCGGC ATCAGTAACC CAAACGAAGC GCGTCAGCTC TCTCTGCTGC TGCGTGCCGG TGCGCTGATT GCGCCTATTC AGATCGTTGA AGAACGTACC ATTGGTCCAA CGCTGGGGAT GCAGAACATC ACTCAGGGCC TGGAAGCGTG TCTGGCAGGT CTGGCGGTTT CGATTCTCTT CATGCTGTTC TTCTATAAGA AGTTTGGCCT GATTGCGACC ACCGCGCTGA TCGCAAACCT GGTATTGATC ATCGGCATTA TGTCCCTGCT GCCAGGGGCG ACGCTGACCA TGCCGGGTAT TGCAGGTATC GTTCTCACCC TTGCGGTGGC GGTCGACGCC AACGTATTGA TAAACGAACG TATTAAAGAA GAATTGAGCA ACGGTCGCTC CGTACAACAA GCGATCGACG AAGGCTATAA AGGCGCTTTC AGCTCCATCT TCGATGCAAA CGTAACAACA CTGATTAAGG TTCTTATCCT GTATGCAGTG GGGACTGGCG CAATCAAAGG CTTTGCTATT ACAACCGGTA TCGGTGTGGC AACGTCAATG TTTACCGCTA TTGTCGGCAC CCGTGCCATC GTGAACCTGC TGTATGGCGG CAAGCGCGTC AAAAAGCTGT CTATCTGA
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Protein sequence | MLNRYPLWKY IMLVVVIIVG LLYALPNLYG EDPAVQITGA RGVAASEQTL IQVQNTLQQE KITAKSVALE EGAILARFDT TDTQLRAREA LVSVLGDKYV VALNLAPATP RWLASINAEP MKLGLDLRGG VHFLMEVDMD TALGKLQEQN MDGLRSDLRE KGIPYTTVRK EDNYGMSITF RDAAARDQAV DYLSTRHRDL VISRQGSNQL RAVMTDARLS EAREYAVQQN INILRNRVNQ LGVAEPLVQR QGSDRIVVEL PGIQDTARAK EILGATATLE FRLVNTNVDQ SAAASGRVPG DSEVKETREG QPVVLYKRVI LTGDHITDST SNQDEYNQPQ VNISLDSAGG NIMSNFTKDN IGKPMATLFV EYKDSGKKDA NGRAILVKEE EVINVANIQS RLGNSFRITG ISNPNEARQL SLLLRAGALI APIQIVEERT IGPTLGMQNI TQGLEACLAG LAVSILFMLF FYKKFGLIAT TALIANLVLI IGIMSLLPGA TLTMPGIAGI VLTLAVAVDA NVLINERIKE ELSNGRSVQQ AIDEGYKGAF SSIFDANVTT LIKVLILYAV GTGAIKGFAI TTGIGVATSM FTAIVGTRAI VNLLYGGKRV KKLSI
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