Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4373 |
Symbol | |
ID | 5086555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009432 |
Strand | - |
Start bp | 17830 |
End bp | 18726 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640485929 |
Product | TrbL/VirB6 plasmid conjugal transfer protein |
Protein accession | YP_001170523 |
Protein GI | 146280368 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 89 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 180 |
Fosmid unclonability p-value | 0.803128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGA TGCTCTACGA CAACTTCGTA GCCAGCCTGA CGGACAAGAT GAACACCGTC AGCAGCGCGA TCTCGGGCGA GCTGACGGCC CCGCTCACGG CGGCCATGAC GCTCTACATC ATGCTCTATG GCTGGGCGAT CCTGCGCGGC TCGATCCACG AGCCGGTGAT GGATTTCACC ATCCGGGGCG TGAAGCTCGC GATCATCTGG ACTCTCGTGG CGAACGCCGG CGACTACAGC TCGTGGGTGG GGGACACGAT CACCAACGGC ATCCCGGCCT TCGTGGAAAC CATCGCGGGC GGTACCCCCG CATCGCTGCC GTCCGATCCG GTCATGGCCA TGGCCGGCGA GATGAGCATG GCGGTGCAGG AGGCCTATGG CACGGGGATC GCGGGCAGCA TCTACGGCTA CCTCATGTCG ATGGTGGTCT GGCTCTCGGC CATTCCCTTC GCGGCCCTAG CCTTCGTGGT GAGCCTTCTC GTCCACTTCG GCCTGACGCT TCTAGCCTCG ATCGGTCCGC TCTTCATCGG CTTCGCGCTC TTCGACTTCA GCCGCGGCTG GTTCTTCGCC TGGCTCGGCC AGACGCTGAA CTTCGCGATC CTGAAGCTGC TGGTCATCGT GCTGATGATC ACGATCACCG CCTTCCTAGG CGACGTCTAT ACCACCGTTG ACATCGAGGC GGGCGCGGCC GCCGTCGCCG CCTTCCTCGT GGCGCTGGCC TGCGCCACGC TCTTCTTCTT CCTTCTTCCC TCCATCGCGG CCGCGCTCAG CGCCGGCGTC GGCGCCTCGA CCGGGGTCGC GCAGCGGTTC GTCGAGCGCA AGATCCTCGG CGGCTTCGGC GGTGGCGGCT TATCCGGCGG GTCCGCGCGG AGCGGATCGG CCACCCGAAC ATCCTGA
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Protein sequence | MLQMLYDNFV ASLTDKMNTV SSAISGELTA PLTAAMTLYI MLYGWAILRG SIHEPVMDFT IRGVKLAIIW TLVANAGDYS SWVGDTITNG IPAFVETIAG GTPASLPSDP VMAMAGEMSM AVQEAYGTGI AGSIYGYLMS MVVWLSAIPF AALAFVVSLL VHFGLTLLAS IGPLFIGFAL FDFSRGWFFA WLGQTLNFAI LKLLVIVLMI TITAFLGDVY TTVDIEAGAA AVAAFLVALA CATLFFFLLP SIAAALSAGV GASTGVAQRF VERKILGGFG GGGLSGGSAR SGSATRTS
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