Gene Rsph17025_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4091 
Symbol 
ID5086264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp141354 
End bp141878 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID640485654 
Producthypothetical protein 
Protein accessionYP_001170248 
Protein GI146280091 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.177028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTGCC ACCAGAACCT CCCCGACACG GCCCCCTGGT ACCTCGTCCA GACAAAGCCG 
AACGCCTTTC GCATCGCCGA ACGGAACCTG CTGAGACAGG ACTTCTCCGT CTTCTCCCCC
ACACAGAACC AGACGAAAAA ACACGGAACG CGCTTCCGGC ACACCGTCCA GCAGCTCTTC
CCGGGCTACC TCTTCGTCCG CTTCAATCCC GAATTCCCCC AGTGGCGCGC CATCAACGCA
ACCTACGGCG TCTCGCGTCT CGTCACCTTC GGAAACATCC CCAGCCCCGT CCCGCACGCG
CTCATCGCAG GCCTGCGCCA GAGATGCGCA AACGACGGAA CCCTCCTGCC GCCCGAGCAG
CTCAGCCTCG GCGACCGCGT CCGGATCATC TCCGGACCCT TCGCCGACTA TGTCGCAACC
GTCGAGCAGA TCGAGCCCGA CAAACGCGTC TGGATCCTCC TCGATATCCT CGGGGGACAA
ACAAAAACCC AGATCCAGAT CGCGGCGCTG CAGAAAGCAG GATAG
 
Protein sequence
MTCHQNLPDT APWYLVQTKP NAFRIAERNL LRQDFSVFSP TQNQTKKHGT RFRHTVQQLF 
PGYLFVRFNP EFPQWRAINA TYGVSRLVTF GNIPSPVPHA LIAGLRQRCA NDGTLLPPEQ
LSLGDRVRII SGPFADYVAT VEQIEPDKRV WILLDILGGQ TKTQIQIAAL QKAG