Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4091 |
Symbol | |
ID | 5086264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | - |
Start bp | 141354 |
End bp | 141878 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640485654 |
Product | hypothetical protein |
Protein accession | YP_001170248 |
Protein GI | 146280091 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.177028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCTGCC ACCAGAACCT CCCCGACACG GCCCCCTGGT ACCTCGTCCA GACAAAGCCG AACGCCTTTC GCATCGCCGA ACGGAACCTG CTGAGACAGG ACTTCTCCGT CTTCTCCCCC ACACAGAACC AGACGAAAAA ACACGGAACG CGCTTCCGGC ACACCGTCCA GCAGCTCTTC CCGGGCTACC TCTTCGTCCG CTTCAATCCC GAATTCCCCC AGTGGCGCGC CATCAACGCA ACCTACGGCG TCTCGCGTCT CGTCACCTTC GGAAACATCC CCAGCCCCGT CCCGCACGCG CTCATCGCAG GCCTGCGCCA GAGATGCGCA AACGACGGAA CCCTCCTGCC GCCCGAGCAG CTCAGCCTCG GCGACCGCGT CCGGATCATC TCCGGACCCT TCGCCGACTA TGTCGCAACC GTCGAGCAGA TCGAGCCCGA CAAACGCGTC TGGATCCTCC TCGATATCCT CGGGGGACAA ACAAAAACCC AGATCCAGAT CGCGGCGCTG CAGAAAGCAG GATAG
|
Protein sequence | MTCHQNLPDT APWYLVQTKP NAFRIAERNL LRQDFSVFSP TQNQTKKHGT RFRHTVQQLF PGYLFVRFNP EFPQWRAINA TYGVSRLVTF GNIPSPVPHA LIAGLRQRCA NDGTLLPPEQ LSLGDRVRII SGPFADYVAT VEQIEPDKRV WILLDILGGQ TKTQIQIAAL QKAG
|
| |