Gene Rsph17025_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3993 
Symbol 
ID5086168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp17704 
End bp18774 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content75% 
IMG OID640485552 
Producthypothetical protein 
Protein accessionYP_001170152 
Protein GI146279995 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0182739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.26526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCT TCTCCGTCCC CCTGCTCGGC GGCAATGGCC GCCAGGTCCT GCGCGTGTCG 
CTTCAGACCG TGGGGGCGGT CGCGGCGACC TGGGCCGCCC TGTCCTTCGG CCAGTCGCCG
CACCTGTCCT GGGCGATGAT CGCCGCGCTC CTGACGATCG ACACCAGCGC CGACGCCTCG
CTGCGCACCG CGCTCGGCCG GGTGGTGGGG GTGGGGATCG GCACCGCCGT GGGCTTTGCC
GCCGCCGGCC TTCCGGGCCA AGGCGTGCTG CTTCCCCTGC TGGTGGCGGC GGTGGTGACC
AATGCCATCG TCGCGCTGAG GCCGCAGCTC AGCTACGCCG CGATCCTGGC CGCGGTCGTG
GCGGCCGATC CCCATCCCGA GGCGATCGAC ATGCTGGAGC AGGCCGCCGC GATCCTTGTG
GGCACCCTGA TGGGGGCCGC GGCGAGCTTC CTGGTCTGGC CCGTGTTCGG CCGCCAGCGC
GCCCGCGCGG CGCTGCGCGA TGCGGTGGAC GACTGCGTGC GGCTCTTCGA ACTGATCGAG
CGCGGCGTCA CCGAGCCCGG CACCGAGGAG CGTCAGGCGC TGCACGCGCG CTTCCTGAGC
GATCTGGAGA CGGTGCATTC CCGCATCGCC GAAACCCGCT TTGCCCCGCG CCTGCCGGGC
GGATCGGGGC TGCACGAGGT CGCCTCGGCG GTCGAGAGCC TGTGGCACGC GCTGGTGATC
CTCGACCGGG TGGTCCGGCG CGAGGTGAGC GAGCCGGGCC GGGAGCGCCT CGGGCGGCTG
CGCCCCGCGC TCGAGCGGAT GCGCGCCGAG GTCGGCCCCT ATCTTCAGGG CGTGCGCGAG
GCGATGGATG TGGGCCGGCC GCAGCCCACC GACGACCGGG CCCTGATCCG GCGGATCGAG
GAGGCGCGGC GCGAGACGGA TGCGCTGCTC GACGAGGCCC GGGGGCCGGA GGGCCGGTGG
CTCCATGCGC TCGGCTTTGC GCTGGACGAG ATCGGCCGGT CGCTGCGGCA GCTGGGCGGC
ACCGTGGGCC CCCGGGAGGG CCGCGGCAGG GCGGGCCGCG ACGGGGCCTG A
 
Protein sequence
MPPFSVPLLG GNGRQVLRVS LQTVGAVAAT WAALSFGQSP HLSWAMIAAL LTIDTSADAS 
LRTALGRVVG VGIGTAVGFA AAGLPGQGVL LPLLVAAVVT NAIVALRPQL SYAAILAAVV
AADPHPEAID MLEQAAAILV GTLMGAAASF LVWPVFGRQR ARAALRDAVD DCVRLFELIE
RGVTEPGTEE RQALHARFLS DLETVHSRIA ETRFAPRLPG GSGLHEVASA VESLWHALVI
LDRVVRREVS EPGRERLGRL RPALERMRAE VGPYLQGVRE AMDVGRPQPT DDRALIRRIE
EARRETDALL DEARGPEGRW LHALGFALDE IGRSLRQLGG TVGPREGRGR AGRDGA