| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3955 |
|---|
| Symbol | |
|---|
| ID | 5086130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 860664 |
|---|
| End bp | 861299 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640485513 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170114 |
|---|
| Protein GI | 146279956 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0133158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACA TGTCGCTGGC CCTTGTCTTC TCGGCCATGC CGTCGCTGGC CGCCGAGGAC
GTCACGGTGC TGGCCCTGGG CGACAGCCTG ACCGCCGGCT ACGGACTGCC GGAAGGAGAG
GGCTTCGTTC CGCAGTTGCA GCAATGGCTG CGGGACCACG GCCAGGCCGT CGAGGTGGTG
AATGCGGGCG TCTCGGGCGA CACGACGGCG GGGGGGCTCG CACGGCTGGA CTGGAGCCTG
ACCCCCGAGG TCGATGCCAT GATCGTGAAC CTCGGCGGCA ACGACATGCT GCGCGGACTC
GACCCCGGGC TCAGCCGCTC GAACCTTGAG GCGATCCTCA AGGAGGCCCG GGCGCGCGAA
CTGCCCGTGC TGCTGGTCGG GCTCGAGGCG CCGGGCAACT ACGGCCCCGA CTACAAGCGC
GACTTCGACG CGATCTTCCC GGACCTCGCC CGCAGCTACG AGGCCGATCT CGAGGCCAAC
TTCTTCGCGC CGCTGACCGC CCGTCTCGAC GAACCCGACG CGCGCCAGCG TTACATGCAG
CCCGACGGCA TCCATCCCAG CACCGAGGGC GTGGCGGTGA TCGTCGAGGA GATCGGCCCC
AGAGTGCAGG CGCTGGTCGA ACGCGCGCGG AACTAG
|
|---|
| Protein sequence | MRNMSLALVF SAMPSLAAED VTVLALGDSL TAGYGLPEGE GFVPQLQQWL RDHGQAVEVV
NAGVSGDTTA GGLARLDWSL TPEVDAMIVN LGGNDMLRGL DPGLSRSNLE AILKEARARE
LPVLLVGLEA PGNYGPDYKR DFDAIFPDLA RSYEADLEAN FFAPLTARLD EPDARQRYMQ
PDGIHPSTEG VAVIVEEIGP RVQALVERAR N
|
|---|
| |