| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3929 |
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| Symbol | |
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| ID | 5086104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 829568 |
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| End bp | 831223 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640485487 |
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| Product | hypothetical protein |
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| Protein accession | YP_001170088 |
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| Protein GI | 146279930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.720842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.613133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATG CCACGCATCC GACGACCCCA CCTGCCGACG AGGCGATCCC CTCGCCGGAA
GGCCCGACGC AGATCATCGA GACCGAATAC GAGATCGGTC AGGACAATAT CAGCTACCGA
CGAAGGTTCG TCTTCGAAAT CGACATCCAC AACGTCGTCT TCAGCGTCTC CGCGCTCAGC
ATCGTGGCCT TCACGTTCCT CACGCTGATG TTCCAGACGA CGCTGGGCCC GGTCTTCACC
GCCATCCGCG ACACGCTGAC CTCGAACCTC GCCTGGTTCT TCCTGCTGTC GGGCAACCTC
TTCGTGATCG TCTGCCTTGT GCTGGTCTTC CTGCCGCTGG GCCGCATCCG GCTGGGCGGC
CCCGAGGCGA CGCCGGACTA CAACCGCCTG TCCTGGTTCT CGATGCTCTT TGCCGCGGGC
ATGGGGATCG GGCTGATGTT CTACGGCGTC TCGGAACCGC TCGGGAACTT CACCGCGGCC
TTCCAGGGCC CTGTGTTCGA GAACGGAGTG CGGACGGACT GGGCGCCGCT CGATGGCGCG
CCGGGCGATG CCGAAGCCGC GCGGCGCCTC GCCATGGCGG CCACGATCTT CCACTGGTCG
CTGCACCCCT GGGCGATCTA TGCCGTCGTG GCGCTGTCGC TGGCGCTCTT CGCCTACAAC
AAGGGCCTGC CGCTCACGCT GCGCTCGGTC TTCTATCCGA TCTTCGGCGA GCGCGTCTGG
GGCTGGCCGG GCCATGTCAT CGACATCCTT GCGGTCTTCG CCACGATCTT CGGCCTCTCG
ACCTCGCTCG GGATCGGGGC GCAGCAGGCG GGCGCGGGGC TTGATTTCCT CTTCGGCCTG
CCCTCGACCA TGGGCATGAC GGTCTTTCTC GTGATCGTCA TCACCGGGAT CGCCGCCGGA
TCGGTGATCG CGGGGATGGA GAAGGGTGTG AAGCGCCTGT CGGAAATCAA CATGGCGCTG
GCCTTCCTGC TGCTGCTCTT CGTCATCCTC GTGGGCCCCA GCCTGCAGAT CCTGCGCGGC
TTCTTCCTCA ACCTCTACGC CTATGTCCAG AACCTCCCCG CGCTCTCGAA CCCGTTCGGC
CGCACCGACG ACAACTTCCG TCACGGCTGG ACGGCCTTCT ACTGGGCGTG GTGGATCAGC
TGGTCGCCCT TCGTCGGCAT GTTCATCGCC CGCGTCAGCC GCGGCCGCAC CGTGCGCGAG
TTCGTGATCG CCGTGCTGCT GATCCCGTCG CTCGTCTCGA CGCTCTGGAT GACGGCGCTT
GGTGGAACGG CGATCAGCCA GGTGGTGGTC GAGGGGCTGA GCTCGGTCCA GAATGCCGCG
CTCGAGATCC AGCTCTTCGA GATGCTGTCG CACCTGCCGC TGACACAGAT CACGTCGCTG
ATCGGCATCG TGCTCGTGAT CGTGTTCTTC GTCACCTCCT CGGACTCGGG CTCGCTGGTG
ATCGACACGA TCGCCGCGGG CGGCAAGGTC AATGCTCCGG TGCCCCAGAG GGTGTTCTGG
GCGACCTTCG AGGGGCTCGT GGCGATCGCG CTGCTGCTCG GGGGCGGCCT CGCGGCGCTT
CAGGCGATGG CCGTCTCGAC CGGCTTCCCC TTCACCATCG TCCTCCTCGG CGCCTGCTAC
GCTCTGATCA AGGGCCTCGC CGCCGAGCCG CGGTGA
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| Protein sequence | MADATHPTTP PADEAIPSPE GPTQIIETEY EIGQDNISYR RRFVFEIDIH NVVFSVSALS
IVAFTFLTLM FQTTLGPVFT AIRDTLTSNL AWFFLLSGNL FVIVCLVLVF LPLGRIRLGG
PEATPDYNRL SWFSMLFAAG MGIGLMFYGV SEPLGNFTAA FQGPVFENGV RTDWAPLDGA
PGDAEAARRL AMAATIFHWS LHPWAIYAVV ALSLALFAYN KGLPLTLRSV FYPIFGERVW
GWPGHVIDIL AVFATIFGLS TSLGIGAQQA GAGLDFLFGL PSTMGMTVFL VIVITGIAAG
SVIAGMEKGV KRLSEINMAL AFLLLLFVIL VGPSLQILRG FFLNLYAYVQ NLPALSNPFG
RTDDNFRHGW TAFYWAWWIS WSPFVGMFIA RVSRGRTVRE FVIAVLLIPS LVSTLWMTAL
GGTAISQVVV EGLSSVQNAA LEIQLFEMLS HLPLTQITSL IGIVLVIVFF VTSSDSGSLV
IDTIAAGGKV NAPVPQRVFW ATFEGLVAIA LLLGGGLAAL QAMAVSTGFP FTIVLLGACY
ALIKGLAAEP R
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