Gene Rsph17025_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3920 
Symbol 
ID5085468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp819945 
End bp820682 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID640485478 
Producthypothetical protein 
Protein accessionYP_001170079 
Protein GI146279921 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.242157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGA TGAGCTATGG CGGGGCGGCA CTGGCGGGAC TGCTGTCCTT CCTCTCGCCC 
TGCATCCTGC CGATGGTGCC GTTCTACCTC TGCTACATGG CCGGGATCTC GATGCACGAG
ATGCGCGGCG CGGCCGGGAT CGCGCCGGGG GCGCAGCGGC GGCTCGTGGC TTCGGCGCTG
GCCTTCGCGC TTGGCGTCAC GACGATCTTC GTGCTCCTCG GGCTTGGCGC CACGGCCCTC
GGTCAGGCCT TCGCCCGGTG GAAGGAGCCG CTCTCCTATG TCGCGGCCGG CGTCCTCTTC
CTGTTCGGCC TGCATTTTCT CGGTCTGCTG CGCATCCCGT TCCTTTACCG GGAAGCCCGG
ATCGAGTCGC GGGCCGAACC GTCGAGCTTC CTCGGCGCCT ATGTGATGGG GCTGGCCTTC
GGATTTGGCT GGACGCCCTG CGTGGGCCCC GCCCTCGCCG CGATCCTGAT GATCGCGAGC
GGCATGGGCG AGCTCTGGCG CGGCGCCTCG CTGCTGCTGA CCTACGGGCT TGCGATGACG
CTGCCGTTCG TCCTGGCCGC GCTCTTTGCG CAGCCGTTCC TTGGCTGGGT CGGCCGCCAC
CGCCGCCACC TCGGCCATGT CGAGAAGGCG ATGGGCGCCA TGCTCATCCT GTTTGCCGTG
CTGATCGCCA CCAACTCCGT GAACCGGATC GCGGACTTCA TGATCCGGCA TTTCGACTGG
AGCGGAACGC TCACCTGA
 
Protein sequence
MFEMSYGGAA LAGLLSFLSP CILPMVPFYL CYMAGISMHE MRGAAGIAPG AQRRLVASAL 
AFALGVTTIF VLLGLGATAL GQAFARWKEP LSYVAAGVLF LFGLHFLGLL RIPFLYREAR
IESRAEPSSF LGAYVMGLAF GFGWTPCVGP ALAAILMIAS GMGELWRGAS LLLTYGLAMT
LPFVLAALFA QPFLGWVGRH RRHLGHVEKA MGAMLILFAV LIATNSVNRI ADFMIRHFDW
SGTLT