Gene Rsph17025_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3906 
Symbol 
ID5085454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp806044 
End bp807327 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content73% 
IMG OID640485464 
Producthypothetical protein 
Protein accessionYP_001170065 
Protein GI146279907 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2379] Putative glycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.394161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACT GGACCGACGC CACGGCGGCA GCCTTCCTGC GCGGGCTCTT CGCGCGCGCG 
GTGGAGGCGT CCCAGCCCGG CGCGCGCATC CCGCCGCTTC TGCCGCCTGC GCCGGCGGGG
CGTATCCTCG TTCTGGGCGC AGGGAAGGCC GCCGTGGGCA TGGCGCGTGC GGTGGAGGAC
CATTATGCGG ACTTTCCGCG CCTCTCGGGC CTCGTCATCA CGCGGCACGG GCTGGGCGGT
GACGGCTCGC TGCGCCGGAT TGCGCTGCGC GAGGCGGCCC ATCCGGTTCC CGATGCCGCC
GGTATCGCGG CGACCGCCGA GCTTCTGGCG CTGACCGAGG GGCTGGGGCC TGACGATCTG
GTGATCGCGG TCATCTCGGG CGGGGCATCG GCGCTCATGG TGGCGCCCAT CGCGGGGCTG
GCTCTGGAGG ACAAGGTGGA GCTGAACCGG GCGCTGCTGG CCTCGGGCGC GACCATCGCT
GAGATGAACT GCCTGCGCCG TCATCTCAGC CGGGTGAAGG GGGGCCGGCT CGCCGCGACC
TGCGCTCCGG CGCGGGTGGT GGCGCTGCTT GTTTCGGACG TGCCGGGGGA CGATCCCGCC
GTCATCGCCT CGGGGCCCTG TCATGCGGAT CCGACGACGG TCGAGGACGC CAAGGCCGTG
CTGCGTCGGC TGGGGCTCGA CCTGCCGCGG ATCGCGGCGG CGCTGGACGC CGAGGTCGCC
GAGAGCGTCA AGCCGGGTGA TCCGAGGCTC GACCGGGTCG AGAGCCACAT CGTCTGTTCG
CCGCAGATGG CGCTGGAAGC GGCGGCCGAG GCCGCGCGCG CCGAGGGGCT CGCCGTCCAT
GTCCTGGGCG ATGCGCTGGA AGGGGAAGCG CGCGAGACGG GGCGGGTTCT CGCCGGGATC
GCGCGGCAGA TCGTGCTGCG CAATCAACCC TTTGCGCGTC CCTGCCTGCT GCTTTCGGGC
GGCGAGACGA CCGTCTCGAT CCGTGGTCCT GCGGGCATCG GCGGGCGCAA TGTCGAGTTC
CTGCTCGCCT ATCTGCTGAC CGCGCGCGAT CTTCCCGGAT GGGCGCTGGC GGCCGATACG
GATGGGGTCG ATGGCGCGGC CGAGGTGGCC GGTGCGGTGG GTGGGGCGGC GCTTCTGCGC
GCCGCGCGCG CGGCAGGGCT CGATCCCGCC GAGGCGCTGG CGGGGCATGA CGCCCACAGC
TTCTTTGCCG CCCTTGGCGC GCAGGTGGTG ACGGGACCGA CCGGCACGAA CGTCAACGAC
TTCCGTGCAA TCCTCTTGCC CTGA
 
Protein sequence
MTDWTDATAA AFLRGLFARA VEASQPGARI PPLLPPAPAG RILVLGAGKA AVGMARAVED 
HYADFPRLSG LVITRHGLGG DGSLRRIALR EAAHPVPDAA GIAATAELLA LTEGLGPDDL
VIAVISGGAS ALMVAPIAGL ALEDKVELNR ALLASGATIA EMNCLRRHLS RVKGGRLAAT
CAPARVVALL VSDVPGDDPA VIASGPCHAD PTTVEDAKAV LRRLGLDLPR IAAALDAEVA
ESVKPGDPRL DRVESHIVCS PQMALEAAAE AARAEGLAVH VLGDALEGEA RETGRVLAGI
ARQIVLRNQP FARPCLLLSG GETTVSIRGP AGIGGRNVEF LLAYLLTARD LPGWALAADT
DGVDGAAEVA GAVGGAALLR AARAAGLDPA EALAGHDAHS FFAALGAQVV TGPTGTNVND
FRAILLP