Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3901 |
Symbol | |
ID | 5085449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 799341 |
End bp | 800582 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640485460 |
Product | inner-membrane translocator |
Protein accession | YP_001170061 |
Protein GI | 146279903 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.295568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGGA CCATGGGACG GCGCCAGTTG CTCAAGACCG GCGCAGCCTT CGGCGCGGCC AGCCTGGCCA TGCCGTCCAT CCTGCGCGCG CAGGGCGATC CGCTCGTCAT TGCGCATCTG ACGCCACGCA CCGGGTTTCT CGGGCCGATG GGTGAATATG CCGTCATGGC CGCCGACCTG GCCGTCGAGG AGATCAACGC GGCCGGCGGC ATCAACGGGC GCGAACTGCA GATCGTCAAG GAAGATTCGG TCAACCCGCA GACGGCGACC ACCAAGGCCG AGCGCCTGGT CGAGCGGCCC GAGATCGCGA TGATCGTGGG CGAGATTTCC TCGGCCTCGG CGCTGTCGAT CGCGCAGGTG ACGGCGCGGG CGAACAAGCT CTTCATCAAC ACCGGCGCCA ATTCCGACAC GCTTCGCGGA AAGGACTGCA AGCGCACCAT GTTCCATACC GAGGCGCAGA ACGCCATGTA TGTGAACGCC GAGGGCGCCT TCTTCCTGCA GAACGACATG GTGAAGGGCA AGAAGTGGTT CATCGTCAGC GCCGACTACG CCTTCGGCCA TGACCTTCGC AACGGCGCGC TGGCCTTCCT CGAGCGCAAC GGCGGCGAGG TGGTGGGAGA CGAGCTGATC CCCACCGATG CGACGGATTT CTCGTCCTAC CTGCTGTCCA TCCGCAGCCA GGCGCCCGAT CTGGTGGTGG TGAACCTCGC CGGCACGCAA ACGGCCAGCT TCTTCAAGCA GTTCGGAGAA TTCGGGCTCG AGCTTCCGAT CGGCGGCTTC GACTACAACA GCTCGATCGC CTGGGCGACG GGCGTGCGCG ACTTCAAGGG CACCTGGCCC TGCATCTGGA CCCATCAGGT CCAGACCGAT GGATCGCAGG CCTTTGCCAA GGCCTTCCAG GCGAAATACG GCAAGCCGGC CGAGAACCAG GCCTATTCCG ACTATATCGC CATCCGCATC GCGGCCGAGG CGATCAAGGC CACGGGCGGC ACCGACACCG ATGCGCTGAT TGCCTATCTC GAGGATCCGG CGACCGAGTT CGACATCCTG AAGGAGCGCA AGGGCCGGTT CGATCCCGCC TCGCACCAGC TCTTGCAGGA GGTCTATGCC GTCACGGCGG TCGATCCCTC GGAGGCGCCG AACGAATGGG ACATCTTCAC CACCTCGGGA GCGCTGCCCG GCGCGGATGC GCCGCTCGAG GAGCTGATCA AGGGCGCCGT CGGCGGAACC TGCTCGTTCT GA
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Protein sequence | MFRTMGRRQL LKTGAAFGAA SLAMPSILRA QGDPLVIAHL TPRTGFLGPM GEYAVMAADL AVEEINAAGG INGRELQIVK EDSVNPQTAT TKAERLVERP EIAMIVGEIS SASALSIAQV TARANKLFIN TGANSDTLRG KDCKRTMFHT EAQNAMYVNA EGAFFLQNDM VKGKKWFIVS ADYAFGHDLR NGALAFLERN GGEVVGDELI PTDATDFSSY LLSIRSQAPD LVVVNLAGTQ TASFFKQFGE FGLELPIGGF DYNSSIAWAT GVRDFKGTWP CIWTHQVQTD GSQAFAKAFQ AKYGKPAENQ AYSDYIAIRI AAEAIKATGG TDTDALIAYL EDPATEFDIL KERKGRFDPA SHQLLQEVYA VTAVDPSEAP NEWDIFTTSG ALPGADAPLE ELIKGAVGGT CSF
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