| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3880 |
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| Symbol | |
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| ID | 5085428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 779527 |
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| End bp | 780864 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640485439 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001170040 |
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| Protein GI | 146279882 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAC ACGGGGCCGC GCAACCGATG ACCGCCCGCC GCTCGGGGCC GCTCAGGGGG
AGGGCCGAGA TCCCGGGCGA CAAGTCGATC AGCCACCGCG CGCTGATCCT GGGCGCGATG
GCTGTTGGCG AGACGCGGAT CACGGGCCTG CTCGAGGGGC AGGACGTGCT CGATACGGCC
AAGGCGATGC GCGCCTTCGG GGCCGAGCTG ATCCAGCACG GCCCGGGCGA CTGGTCGGTG
CATGGGGTGG GAGTGGGCGG CTTTACCGAA CCCGCCGAGG TGATCGACTG CGGCAACTCG
GGAACGGGGG TGCGGCTCAT CATGGGGTCG ATGGCGACGT CGCCGATCAC CGCCACCTTC
ACGGGCGACG CCTCGTTGCG CAAGCGGCCG ATGGGGCGGG TGACCGATCC GCTGGCGCTG
TTCGGGGCGC GCGCCTACGG GCGCAAGGGC GGGCGGTTGC CGATGACGCT GGTGGGGGCG
GCCGAGCCGG TGCCGGTGCA CTACACGGTG CCGGTGCCGT CGGCGCAGGT GAAGTCGGCC
GTCCTGCTCG CGGGGTTGAA CGCGCCGGGC CAGACGGTGG TCGTCGAACG CGAGGCCACG
CGGGACCATT CCGAGCGGAT GCTGCGCGGC TTCGGGGCGG AACTGACGGT CGAGGCCGCG
CCCGAAGGGC AGATCATCAC CCTGACGGGG CAGCCCGAGC TGCGGCCGCA GACGGTGGCG
GTGCCGCGCG ATCCGTCCTC GGCGGCCTTT CCGGTCTGCG CCGCGCTGAT CGTGGAAGGG
TCGGAGATCC TCGTGCCGGG GGTCAGCCGG AATCCGACGC GGGATGGCCT TTATGTGACG
CTGCTCGAGA TGGGGGCGGA CATCGCCTTC GAGAACGAGC GCGAGGAAGG GGGCGAGCCG
GTCGCGGACC TCCGCGTGCG CGCCTCGGAG CTGAAGGGGG TGGAGGTGCC GCCCGAGCGC
GCGCCGTCGA TGATCGACGA ATATCCGATC CTGTCGGTGG TGGCGGCCTT CGCGGACGGC
ACCACCATCA TGCGCGGTGT GAAGGAGTTG CGCGTGAAGG AGAGCGACCG GATCGACGCC
ATGGCGCGCG GCCTCGAGGC CTGCGGCGTG CGGATCGAGG AGGACGAGGA CACGCTGGTC
GTGCACGGGA GGGGGAGCGT TCCGGGAGGG GCGACCTGCG CCACCCACCT CGACCACCGC
ATCGCGATGA GCTTCCTCGT GCTCGGCATG GCCGCGGAGG CGCCGGTCGC GGTGGACGAC
GGCTCGCCCA TCGAGACCTC CTTTCCGATC TTCATGGGGT TGATGCGCAC GCTCGGGGCG
GATCTGTCGG ACGGTTGA
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| Protein sequence | MSGHGAAQPM TARRSGPLRG RAEIPGDKSI SHRALILGAM AVGETRITGL LEGQDVLDTA
KAMRAFGAEL IQHGPGDWSV HGVGVGGFTE PAEVIDCGNS GTGVRLIMGS MATSPITATF
TGDASLRKRP MGRVTDPLAL FGARAYGRKG GRLPMTLVGA AEPVPVHYTV PVPSAQVKSA
VLLAGLNAPG QTVVVEREAT RDHSERMLRG FGAELTVEAA PEGQIITLTG QPELRPQTVA
VPRDPSSAAF PVCAALIVEG SEILVPGVSR NPTRDGLYVT LLEMGADIAF ENEREEGGEP
VADLRVRASE LKGVEVPPER APSMIDEYPI LSVVAAFADG TTIMRGVKEL RVKESDRIDA
MARGLEACGV RIEEDEDTLV VHGRGSVPGG ATCATHLDHR IAMSFLVLGM AAEAPVAVDD
GSPIETSFPI FMGLMRTLGA DLSDG
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