Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3866 |
Symbol | |
ID | 5085414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 764462 |
End bp | 765667 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640485425 |
Product | TRAP-type C4-dicarboxylate transport system periplasmic component-like protein |
Protein accession | YP_001170026 |
Protein GI | 146279868 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0415964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTGGG AGACGATCCG CCTCGCCTTC ATCGCCATCG TCAGGAACAA GCTGCGGTCG TTCCTGACGG TCCTCGGGGT CGTGATCGGG GTCGCCGCGG TCATCGCCAT GGTGACGGTG GGGCAGGGCT CGTCGGCGCA GGTCTCGGCC AATGTGGCAA GCCTCGGGAC CAACGTGTTG ATCGTGCGGC CGGGCAAGCG GATGATGGGG CCGGGGACGC GGGACACCTC GCCCGCCTTC ACGCTGCGCG ATGTCGAGGC CCTGCAGGAG CTGCCCGTGA TCCGCTCGGT CGCGCCCAAC ACCTCTTCGG GCCAGACCGT GATCTATGGC AATGCCAACG CCACCACCTC CATCACCGGC ACCACGAGCG ACTATCTGAC CGTGGCGAAC TGGGTGCTCG ACAGCGGGCG GGCCTTCACG ATGGCCGAAG AACGGCAGGG CGCCGCCGTC TGCGTTCTGG GCGACACGGT GCGCCAGAAG CTCTTCGGGG CGGCCGATCC GCTTGGCCGG ACGGTGCGGA TCCGGTCGAT CTCGTGCGAG GTGGTGGGCC TTCTGCAGGC GAAGGGCGCG GGCTCGTTCG GGCAGGATCA GGACGATCTC GTGCTGATGC CGATCCGCAC CGTGCAGCGG CGGCTCGCGG GCGATCAGGA TGTCTCGGGC ATGTCGATCG CGTTGCAGGA GGGCGTCTCG GCCACCCGCG GCATCCGCGA GATCAGCGCT CTCCTGCGCG AGAGGCGCCG TATCGGCCCG GGCGACGAGG AGAATTTCTC GGTCACCGAC ATGAAGGAGA TCGCCTCCAT GCTGACCTCC ATCAACACGG TGCTTGCGGG GCTGCTGTCG TCGGTGGCGG CCGTGAGCCT GCTGGTGGGC GGCATCGGCA TCATGAACAT CATGCTCGTG TCGGTGACCG AACGCACGCG CGAGATCGGC ATCCGCCTTG CGGTGGGGGC CACGGCGGGA CAGGTGCTGA CACAGTTCCT TGTCGAGGCG GTCGTGCTGT CGGTGCTGGG GGGCATGATC GGAATCGCGG CGGGCCTCGG TCTCGCCTTC GCGGCCTCGC GCTACATGCT GATCCCCTTC ACGCCGGACC CGCTGGTCGT GCTGCTGGCC TTCGGCTTCT CGGCGCTGGT GGGGGTGATC TTCGGCTATT TCCCCGCACG CCGTGCCGCC CGCCTCGACC CGATCGAGGC CCTTCGCCAT CAGTGA
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Protein sequence | MLWETIRLAF IAIVRNKLRS FLTVLGVVIG VAAVIAMVTV GQGSSAQVSA NVASLGTNVL IVRPGKRMMG PGTRDTSPAF TLRDVEALQE LPVIRSVAPN TSSGQTVIYG NANATTSITG TTSDYLTVAN WVLDSGRAFT MAEERQGAAV CVLGDTVRQK LFGAADPLGR TVRIRSISCE VVGLLQAKGA GSFGQDQDDL VLMPIRTVQR RLAGDQDVSG MSIALQEGVS ATRGIREISA LLRERRRIGP GDEENFSVTD MKEIASMLTS INTVLAGLLS SVAAVSLLVG GIGIMNIMLV SVTERTREIG IRLAVGATAG QVLTQFLVEA VVLSVLGGMI GIAAGLGLAF AASRYMLIPF TPDPLVVLLA FGFSALVGVI FGYFPARRAA RLDPIEALRH Q
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