Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3644 |
Symbol | |
ID | 5085503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 532193 |
End bp | 532915 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640485201 |
Product | hypothetical protein |
Protein accession | YP_001169817 |
Protein GI | 146279659 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.128261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0387613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGGC CAAGGGAAAG CGGCATCGAG CGATTGCGCA GCGGCATCCT CGAGATGATC CGCGAGCTGG GCCTGTCGTT CGGCGACCGC CTGCCGACCG AGAAGGAGAT GGTCGAACGG TTCCAGGTCT CGCGCCCGAC CCTGCGCGAG GCGCTGAAGC TTCTGGAGCA GGACGCGATC ATCGACGTGC ATCAGGGCAA GGGCCGCTTC CTTGCCGCCG GGGCGCTGCT GACCATCGCC CGCCCGATCA CCAGATTCGA GAGCGTCTCG CAGATGGTGG CGAGCCACGG CTACACCGCC GAGACGCGGC TGCTGGGCTT CACGACCGTC CCCGCCGATG CCGAGACCGC GCCCCGCCTT GCCGTCCCGG AGGGCACGCC CCTCGTCCGT GTCGAGCGGC TGCGCAGCAG CGGCGGCCAG CCGCTGGTCT ATTCCATCGA CTGGCTGCCC AAGGCCCTTG TCGAGGGCAC GGAGGCGACC CCGGACTGGA GCGGGTCGCT TGTCGAGCTT CTGGCGGGCG CGGGGCGCGG GCCGGTCGCC TCGACGGCGA TGGTCCGCGC CGTGACCCTG CCGCCCGAAG CCGCCCGGCT CCACGGGCTC GAGGAGTTCG GTCCTGCGCT TCTGATCGAG GAGGTCTGCT ACGCCGCCGA CGGCACCCGG GTGATCTACG CGATGGACTA TCACCGGGGC TCGGCCTTCT CGTTCAGCTT CGTGCGGAAG TAG
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Protein sequence | MDRPRESGIE RLRSGILEMI RELGLSFGDR LPTEKEMVER FQVSRPTLRE ALKLLEQDAI IDVHQGKGRF LAAGALLTIA RPITRFESVS QMVASHGYTA ETRLLGFTTV PADAETAPRL AVPEGTPLVR VERLRSSGGQ PLVYSIDWLP KALVEGTEAT PDWSGSLVEL LAGAGRGPVA STAMVRAVTL PPEAARLHGL EEFGPALLIE EVCYAADGTR VIYAMDYHRG SAFSFSFVRK
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