Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3638 |
Symbol | |
ID | 5085497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 525220 |
End bp | 525912 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640485195 |
Product | hypothetical protein |
Protein accession | YP_001169811 |
Protein GI | 146279653 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.513406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CCAGACAGAT CCAGTCCGGC AGCAGCGACA CGGTGGCCGA GCGGCTGGCA CTCGCCATCC ACGAGCACCG GCTGCAACCG GGCACCAAGC TCTCGGAGGA CGAGGTGGGC GAGATCTTCG GAGTGAGCCG CACGGTCGTC CGTGCGGCCC TCCAGCAGCT TTCGCACGAA CGGCTCGTGA CGCTGCGGCG CAACCGCGGC GCCTATGTGG CGCAGCCCTC GGTCCGCGAG GCGCGCGAGG TGTTCGAGGC CCGCTCGCTG CTCGAGCCGC GCACGGCCCG CTCGGCGGCC GAACGGACCA CGGCCGAGGA CATCGCCCGC CTGCAACGCC ACATCGACGC CGAGCATACG GCGCTCGACG CGGGCGACCC CGGCCGCGCG CTGCGTCTGT CGGGCCTGTT CCATATCGAG ATCGCGCGCA TCGCCGATCA GGACACGATC CGCGACTTCA TCACCCAACT CGTTGCGCGA TCGTCGCTGA TCATCGCGCT CTACTGGCAG CGCCGGGCCG CGCTGTGCGA AAGCCATGCC CACCACGCGC TGCTCAGGGC GCTCGAGGTC CGGGACGGCG CCCATGCGGA AGAGCTGATG AAGGGCCACC TGCTCGACCT CGTCTCATCG CTGGACCTGC GCCGCCCGGC CCCGCCCGCC CATTCGCTCA AGGAGGCTCT GGACCGCCCA TGA
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Protein sequence | MSDTRQIQSG SSDTVAERLA LAIHEHRLQP GTKLSEDEVG EIFGVSRTVV RAALQQLSHE RLVTLRRNRG AYVAQPSVRE AREVFEARSL LEPRTARSAA ERTTAEDIAR LQRHIDAEHT ALDAGDPGRA LRLSGLFHIE IARIADQDTI RDFITQLVAR SSLIIALYWQ RRAALCESHA HHALLRALEV RDGAHAEELM KGHLLDLVSS LDLRRPAPPA HSLKEALDRP
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