Gene Rsph17025_3569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3569 
Symbol 
ID5085721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp455740 
End bp456288 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID640485127 
Producthypothetical protein 
Protein accessionYP_001169743 
Protein GI146279585 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.549682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAA CCCTTGCGGC AGCGCCGGCC CGGTCGGGCG GCAATGCCTT CATCCGAACG 
GTCCATGCCA TCTCGACCGT CTGCGGCTGG ACCGCCGCGG CCTTCACGGT GATCGCGCTG
TTCGTGACCT GCCACATGAT CTTTGTCCGC GCGGTGCTGA ACCAGTCCAC GATCTGGCAG
ACCGAGGCGG TGATCTACCT GATGATCGCG GCCACGACCG TCGGCCTGCC CTACGTCCAG
CGCCTGCGGG GGCATGTGAA CGTCGATCTC GTGCCCCACA TGCTGCCGCG GCGCGTGCGG
CGCGTGCTGG CCTATGTCGT GCTGATCTCG ACCATTGCCG TGATGGCGGT GCTGGCCTGG
TATGCGTTCG ACGTCTGGCA TCAGGCCTTC GACCGCAACT GGAAGTCCTC GACCGTCTGG
GCCGCGCCGC TGTGGGTGCC CTATCTGGCG ATGCCCGTGG GCTTCGGCCT CTTCATCCTG
CAACTGGTGG CGGATCTGGT GGGGCTCATC ACCGGCGCCG AGCCGCCCTT CGGCATCGAG
GACCATTGA
 
Protein sequence
MSGTLAAAPA RSGGNAFIRT VHAISTVCGW TAAAFTVIAL FVTCHMIFVR AVLNQSTIWQ 
TEAVIYLMIA ATTVGLPYVQ RLRGHVNVDL VPHMLPRRVR RVLAYVVLIS TIAVMAVLAW
YAFDVWHQAF DRNWKSSTVW AAPLWVPYLA MPVGFGLFIL QLVADLVGLI TGAEPPFGIE
DH