Gene Rsph17025_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3566 
Symbol 
ID5085718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp451601 
End bp453112 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content68% 
IMG OID640485124 
Productmalonyl-CoA synthase 
Protein accessionYP_001169740 
Protein GI146279582 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.676985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.895128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTC CGCTTTGCGA CGCACTCGTA GCCCCTCTTG CGCGGCGCAC CACGCCCGTC 
CTGTTCGACG TCGAGGGGCG CGGCCTGAGC GGGGCCGAAC TGCACGGCAA GGCCATGGCG
CTGGCCGCGG CGCTGGCCGG GCTCGGGCTG AAGCCGGGCG ACCGGATGGC GGTGCAGATC
GACAAGAGCC CCCGGGCGCT TGCGCTCTAT CTGGCGGCGC TGTCGGCCGG CGTGGTGTTC
CTGCCGCTGA ACACGGCCTA CACCGCGGGC GAGGTGGATT ATTTCGTCGG CAATGCCGAG
GCCGCGCTCC TGGTGGGCGA TCCATCCCGC GCCGAAAGCC TCGCCCCCGT GGCCGCCCGC
CACGGCGCCC GGTTCGAGAC GCTGGATGCC GCAGGCGAGG GCAGCCTGAC CGAGCTGGCC
CGGCTTGCGG GGCCGAGCTT CACGCCGGTC GCGCGCGACG CCGAGGATCT GGCGGCGATC
CTCTACACCT CCGGCACCAC CGGCCGCTCC AAGGGGGCGA TGCTCAGCCA GTCGAACCTG
CTCTCGAACG CCGAGGTGCT GGTGCAGGAA TGGCGCTTCA CCGAAAAGGA CGTGCTGCTT
CACGCGCTGC CGATCTTCCA CACGCACGGT CTGTTCGTCG CGATCAACGT CGTCCTGCGT
TCGGGCGGGT CGATGATCTT CCTGCCGGGG TTCAAGGTCG ATCAGGTGAT CGCGGCGCTG
CCGCGGGCGA CGAGCATGAT GGGCGTGCCG ACCTTCTACA CGCGTCTGCT GGATGATCCG
CGGTTCGACC GCGACCTCGT CGCGCACATG CGCCTCTTCA CCTCTGGCTC GGCGCCGCTT
CTGGCCGAGA CCCATGTGCA GTTCGAGGAG CGCACCGGGC ACCGCATCCT CGAACGTTAC
GGCATGACCG AAACCAACAT GAGCACCTCG AACCCCTACG ACGGCGCCCG CAAGCCCGGC
ACGGTGGGCC GCCCGCTGCC GGGGGTCGAG CTGAAGATCA CCGATCCCGT CACCGGAGAG
GATCTGCCGC AGGGCGAGCC CGGCATGATC GAGGTGCGGG GTCCGAACGT CTTCAAGGGC
TACTGGCAGA TGTCCGAGAA GACCCGCGAG GAGCTGCGCG AGGACGGGTT CTTCATCACG
GGCGACATCG GCGTGATCGA CCCCGACGGC TATGTGAGCA TCGTCGGCCG GCAGAAGGAT
CTCATCATCA CGGGGGGCTA CAACGTCTAT CCCAAGGAGA TCGAACTGGT GCTCGACGAG
CAGCCGGGCG TTCTCGAGAG TGCGGTGATC GGGGTGCCCC ACCCGGACTT CGGCGAGGCG
GTGGTGGGGG TGATCGTGCC GCGGCCCGGT GCCGAGGTCG ATGGGGCCGC TCTCGAGGCT
GCGATGGCGC AGAGCCTTGC GCGGTTCAAG CAGCCCAAGC ACATCGCCAT CGTCCCCGAG
CTGCCGCGCA ACACGATGGG GAAGGTGCAG AAGAACCTGC TCCGGCAGGA TTTCGCCTCC
CTCTTTGCCT GA
 
Protein sequence
MTSPLCDALV APLARRTTPV LFDVEGRGLS GAELHGKAMA LAAALAGLGL KPGDRMAVQI 
DKSPRALALY LAALSAGVVF LPLNTAYTAG EVDYFVGNAE AALLVGDPSR AESLAPVAAR
HGARFETLDA AGEGSLTELA RLAGPSFTPV ARDAEDLAAI LYTSGTTGRS KGAMLSQSNL
LSNAEVLVQE WRFTEKDVLL HALPIFHTHG LFVAINVVLR SGGSMIFLPG FKVDQVIAAL
PRATSMMGVP TFYTRLLDDP RFDRDLVAHM RLFTSGSAPL LAETHVQFEE RTGHRILERY
GMTETNMSTS NPYDGARKPG TVGRPLPGVE LKITDPVTGE DLPQGEPGMI EVRGPNVFKG
YWQMSEKTRE ELREDGFFIT GDIGVIDPDG YVSIVGRQKD LIITGGYNVY PKEIELVLDE
QPGVLESAVI GVPHPDFGEA VVGVIVPRPG AEVDGAALEA AMAQSLARFK QPKHIAIVPE
LPRNTMGKVQ KNLLRQDFAS LFA