Gene Rsph17025_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3558 
Symbol 
ID5085710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp445338 
End bp446549 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content63% 
IMG OID640485116 
Producthypothetical protein 
Protein accessionYP_001169732 
Protein GI146279574 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCG CCGTGCCCGG CAAGATGCGC CGCAGGCGGA TGACAGTCCT GAACTCCGCT 
GGTGATTATC AGCGGCTCAT CGAGGTTCTT CGGAGCTTTG CGTTACCCGT CATGATCGGG
TTCGAGGCGA CGGGCAATTA TCACCGTGCC CTGATGTATG CCTTGGGGGG TGCGGGTTTC
GAGCTGAGGC TCGTCTCGTC CGTTGCTCTC GCCCGCACCC GCGAGGCATT GCACAACAGC
TGGGACAAGA ACGATCCGAA GGATGCCCAA GTCATCCTGC ACATGCTGCA GATCGGGGCG
GTCCAGGTCT TCCAGGATCC CCTGGTGGTC GGCATCGGCG ATATCCAGGA GCTGTCAAAG
ACCTACGAGA TGGTCGCACA CGCCAAGACC GAACTGTGGC ACCGGATTCT GACGCACTAC
CTGCCGCTTT ACTTCCCTGA GGCAGACCGG TTCCATCGCA GTTCTCGCGG CGACTGGTTC
CTGGCGTTCC TCGAAGCCTT TCCATCGCCC CACATGATCA CCGCCATGGA CAAGGACGCC
TTCGTCGCGG CGGCATGGCC GGTGATTGGC CGCCGTGTCA GCAAGGCCGC ACTCCTGGCG
GATATCTACG AGACATCAAG AGCTTCCGTC GGTCTTCCCG TGGCAGCTGA CTCTGATGCC
ATTCGGATGT TCCGCCTTGT TCTGGCGCAG GGACGCAGCC TCATCCAGAG CCGCAATGCC
ATTGAGGAAC GCGCCGCTGA GCTTCTCGGC GACCATCCTG ATTATTGCCT GCTGCGCTCG
ATCCCGGGTA TCGGACCCAT CAACGCGCTC GCCGTGCTGG CCGAGGCTGG CGACCTCCGG
CGCTTTCGCC ACCACCGCCA GTTCCTGAAG TTCTGTGGCA TGGATCTGGC CACCGTGCAG
TCGGGCCAGT TCCGCGGCCG CAGCAAGATC TCGAAGTATG GCAACGCCCG GTTGCGTCGC
ACGCTCTGGC TGGCCAGTCA GGCCGCCGTG CTGAAGCCTG CCAACAGCTT CCGTGACAAG
TTCGAGCGCT ACATCGCGCA GGATCGGCAC AACCCCGATC TGCGCCGCAA GGCCTACACT
GCCATCGCCG CGAAGATGGC ACGCACCATT CACGCCGTGA TCAAGTCCGG CGAACCCTAT
CGCCCCTTCT TCGAGGGGGT GAGCCCAGGC GGAAGGACCC CTCTCTGTAG AGCCGTGGAG
GCAGGTTCCT GA
 
Protein sequence
MLIAVPGKMR RRRMTVLNSA GDYQRLIEVL RSFALPVMIG FEATGNYHRA LMYALGGAGF 
ELRLVSSVAL ARTREALHNS WDKNDPKDAQ VILHMLQIGA VQVFQDPLVV GIGDIQELSK
TYEMVAHAKT ELWHRILTHY LPLYFPEADR FHRSSRGDWF LAFLEAFPSP HMITAMDKDA
FVAAAWPVIG RRVSKAALLA DIYETSRASV GLPVAADSDA IRMFRLVLAQ GRSLIQSRNA
IEERAAELLG DHPDYCLLRS IPGIGPINAL AVLAEAGDLR RFRHHRQFLK FCGMDLATVQ
SGQFRGRSKI SKYGNARLRR TLWLASQAAV LKPANSFRDK FERYIAQDRH NPDLRRKAYT
AIAAKMARTI HAVIKSGEPY RPFFEGVSPG GRTPLCRAVE AGS