Gene Rsph17025_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3467 
Symbol 
ID5085883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp346175 
End bp346897 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID640485032 
Producthypothetical protein 
Protein accessionYP_001169648 
Protein GI146279490 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2978] Putative p-aminobenzoyl-glutamate transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0456304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTA CCATCCGGCA ATCGGGCGAC ATCGTCGAGC AGACGACCTC GGTGTGCAGC 
CTTGTCTCGG CCGATGGCAT CCGCTTCATG CTGACCTCGC CGGTCGCGAA CTTCCTGGGC
TTCACCGGAG TGGGCGTGAT CCTCGTCGCG ATGATCGGTG TCGGTCTTGC CGAGGAGTCC
GGGCTCAACG ACGCGATCCG CGCGGTGAAC CCGGGCGCCG AGATCAGCGT GGTGGGCAAC
CTGTTCTTCA TGATCGCGTT CTCGATCCTG ATGGGCCTCA TCTGCACCGT TCTGACCGAG
CGCATCATCG AACCGCGCCT CGGACCCTAC AGGGGCGGCG TGCCGGTCGA GGCGAGCCAC
GGCCTCTCGG GCAGCGAGCA GCAGGGCCCG AGGAACGCGG GCCGGGCGCG CGGCGCGGGC
ACCATCGCCA ACGTGACCGA GGCCATCGGG CTGATCGTCA AGGCCTGGGG CAACCTGGCG
GGGATGATCT TCCTTCTGTT TGTGATCGCG AACCTCATCT CCTTCTTCAA CTACATCAAC
CTTGCGACGG TTCTGGCCGT CAACCTTGCC GACCTTCTGC AAGACGCGCC GATCGGGCGC
GCGGGCTTCA TCGTCCTGTT CGTGCTGGTG GCGGCGATCA TCGACATCAT GGGCCGCGCT
GAGACGCGTC GGCCCCGGAT CTGTTTCGCA ATGACCCTTG CCATGACGGA GAACGGAACA
TGA
 
Protein sequence
MTATIRQSGD IVEQTTSVCS LVSADGIRFM LTSPVANFLG FTGVGVILVA MIGVGLAEES 
GLNDAIRAVN PGAEISVVGN LFFMIAFSIL MGLICTVLTE RIIEPRLGPY RGGVPVEASH
GLSGSEQQGP RNAGRARGAG TIANVTEAIG LIVKAWGNLA GMIFLLFVIA NLISFFNYIN
LATVLAVNLA DLLQDAPIGR AGFIVLFVLV AAIIDIMGRA ETRRPRICFA MTLAMTENGT