Gene Rsph17025_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3462 
Symbol 
ID5085878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand- 
Start bp338693 
End bp339370 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID640485027 
Producthypothetical protein 
Protein accessionYP_001169643 
Protein GI146279485 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0939176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCTG TCGCGGTACT GATCGACGGG GACAATCTGT CTGGCAAGCA TGCCGCGCGG 
ATTGTGGAGG TCGCGGCGGC GCTGGGTCGA CCGACCGTGC AGCGGGTCTA TGTCGACGCA 
CAACGCCCCT GCGACTGGCA CGCGGCGCGC GGATTTCGCC TCATGCACGC AGGGACGGGG 
AAGAACGCCT CGGATCTGTT GCTGGCGCTC GACGCGGTCG AACTGGCCCT GCGCGGGGAC 
GCCGATCAAT TCGTGATCGC CAGCTCGGAT CGCGATTTCA CTCATCTGGC GCTTCGATTG 
CGGGAATACG GGGCCTCGGT GACAGGCGTG GGCGAGGCCA AGACGCCGCA GTCCTTCCGC 
GCCGCCTGCG CCGATTTCAT CGTGATCGGG TCGCAGCGTG TGGCTTCGGT GCCGACGCCG 
CTTCCCAAGG AGGCGCAAGG CGAGCTGGAC CGAAAGATCG GGGCGCTGAT GGCTGAGCAG 
GGATGTGTGA GCGAGGGCAT GCGGATTGCG ACCCTCGGCC CGCTGATGCA CGCTCGGCAC 
GGCACGTGCA TCAGTACCTT TTTGGAACGC ACCTGGCGGG CCTATCTGGC GGCGCGGCCC 
GAGCTATACG CGCTGGACCC GCGCGGCCCC GAAGCCCGGG TGCGACTGCG TCTAGGGAAG 
ATCGGCGGGG CCGCCTGA
 
Protein sequence
MGAVAVLIDG DNLSGKHAAR IVEVAAALGR PTVQRVYVDA QRPCDWHAAR GFRLMHAGTG 
KNASDLLLAL DAVELALRGD ADQFVIASSD RDFTHLALRL REYGASVTGV GEAKTPQSFR 
AACADFIVIG SQRVASVPTP LPKEAQGELD RKIGALMAEQ GCVSEGMRIA TLGPLMHARH 
GTCISTFLER TWRAYLAARP ELYALDPRGP EARVRLRLGK IGGAA