Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3405 |
Symbol | |
ID | 5086066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 281031 |
End bp | 282263 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640484971 |
Product | hypothetical protein |
Protein accession | YP_001169587 |
Protein GI | 146279429 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATG ACATCTTCCG GCACGTCTTG CGCAGCGTCT CACGCCTGGC CGTCGCCCTC GCCCTTGCAA CGACTGTGGC TCTGGCCGAA GACCTGCCAG AGCCACAGTT CCGGCTCGCA CCCGGCGACG TCATCGATAT CTCGATCTTC GCGAACGCCG ACCTGTCCGG CAGCTATCCG CTGCGCGAGG ACGGATCGAT CGCCCTGCAT CTGGTGGGGG CGTTGCAGGT CAGTGGCAGC ACGCCCGCCG AGGTCGAGCA GATGTTGCGC GACCGTCTCG GATCGATCAT CCCCGAGCCG ATCTCAACCA CCGTGTCTGT CTCGCGCTGG CGGCCGGTGG CGCTTCTCGG CGTCGTGGCG CAGCCCGGAC TTTATGACTA CAGCAGCGGG CTCGACGTGA TGCGCGCGGT GGCGCTGGCG GGCGGCTTGT CGCGCCTCGC CTCGGACGCT CCGGTGACGC AGGCGATGCG GATGACCGAA GAGGCCGGCC GCCACCTGGG CCTGAAGGCG CGACTGGCCG CTCTTCTGCT CGAGGAAGCG CGGCTGCTGC AAGAGCGAGC GGGAGGCGCC GATCTGCCGA TCCCGCCTGA AGTCGAACAA CTGGTCGGCG CCGTCACCGC CAAGCGGATG ATGGAAGAGC AGGTCCACCT GATGAATCTG CGCCGGCAGA TCCACGAGAT CCGCACCCAG GGCGAGGAGG AACGCGCGAG CCTCTCGCTG ATCGAGGCGC AGTCCTTTGC GGAGCGGCGC TCGCTGTCGC AGCGCCAGAT CGAGGAAATC GATCGGGACC TCGAGAAGCA ACGGTCGCTG CGGGAACAGG GGCTTGCGGT GGCTGCGCGC TATCTCGAGG TCACGCTGGC CGCGGACCAG TATCGCAGCA ACGAACTGGA AGCGGCTGCG TTCGAGGCCG CCGCCCGGCA AAGCGCCAGC GCCGCGACCA GCGCCGCGCG CGGGCTTGTC AGCCAGCGCG ACGAGGAGAT TACCCAGCGC CTGACGGCCG TCCGGCAGGA GATCGCCGAA ACACGCGCCA CCCTGGCGGC AAGCCGCAAT CTGCTGGTCG AATTCGGCGG CGGCGCCGGG CTCGCCGATT CAGACGCGCA GCCACGCTAT CTCGTCACGC GCCGGACGAT GACGGACACC CGGACCTACA CCGCCACGCC GATGTCGCTG CTGCAACCCG GAGATACGCT TGAAGTGCTT CTCGACCCGC AGCTTCCGGA AGGGCCGCAG TGA
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Protein sequence | MKDDIFRHVL RSVSRLAVAL ALATTVALAE DLPEPQFRLA PGDVIDISIF ANADLSGSYP LREDGSIALH LVGALQVSGS TPAEVEQMLR DRLGSIIPEP ISTTVSVSRW RPVALLGVVA QPGLYDYSSG LDVMRAVALA GGLSRLASDA PVTQAMRMTE EAGRHLGLKA RLAALLLEEA RLLQERAGGA DLPIPPEVEQ LVGAVTAKRM MEEQVHLMNL RRQIHEIRTQ GEEERASLSL IEAQSFAERR SLSQRQIEEI DRDLEKQRSL REQGLAVAAR YLEVTLAADQ YRSNELEAAA FEAAARQSAS AATSAARGLV SQRDEEITQR LTAVRQEIAE TRATLAASRN LLVEFGGGAG LADSDAQPRY LVTRRTMTDT RTYTATPMSL LQPGDTLEVL LDPQLPEGPQ
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