| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3366 |
|---|
| Symbol | |
|---|
| ID | 5086026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 244032 |
|---|
| End bp | 244373 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640484934 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169551 |
|---|
| Protein GI | 146279393 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.8287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.256486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGA TGTCGATCTG CGAGGGGATC CGCGGCATCG TCGAGGATCA GGCGCGGGCC
CACGGCTTCG CTTCGGTCCG GGTTCTCCGG CTCGAGATCG GCCGTTTCGC CGGGGTCGAG
CCTGCGGCCC TGACCTTTGC CTTCGACGTG GTGATGCGCG GCAGCCCCGC CGAGGGCGCA
CGGCTCGAGA TCACCCATCT TCCGGGCCGC GCGATGTGCT ACGACTGCGC CGAAGAGGTC
GAGATCGGCG ACCGCTTCGA CCCCTGCCCG CGCTGCGGCG GCGGCAAGCT CATGCCCATC
TCGGGCGACG AAATGCGGAT CAAGGACATG GAGGTTCAGT GA
|
|---|
| Protein sequence | MHEMSICEGI RGIVEDQARA HGFASVRVLR LEIGRFAGVE PAALTFAFDV VMRGSPAEGA
RLEITHLPGR AMCYDCAEEV EIGDRFDPCP RCGGGKLMPI SGDEMRIKDM EVQ
|
|---|
| |