| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3350 |
|---|
| Symbol | |
|---|
| ID | 5085841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 228715 |
|---|
| End bp | 229662 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169536 |
|---|
| Protein GI | 146279378 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.373497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAA CGAAACCCGG CCGCATCGCG GTCGTCGGCT CCAACATGGT CGATCTGGTG
ACCTACATCA CGCGGATGCC CGCCCCCGGC GAGACGGTCG AGGCGCCCGA CTTCGAGATC
GGCCCCGGCG GCAAGGGCGC CAATCAGGCG GTGGCGGCGG CCCGGCTCGG CTCGCAGGTC
GCCATGGTGA CCAAGGTCGG CGGAGACATC TTCGGTGAGA ACACCCGGCG CAACCTGGCC
GAGCAGGGCA TCGACACGAC GCATGTGGGC ACGGTGCCCG GGAAATCCTC GGGCGTGGCG
CCGATCTTCG TGGATCCTCA GGGCGAGAAC TCGATCCTGA TCGTCAAGGG GGCGAACGCC
GACCTTTCGC CCGCCGACGT GGATGCGGCC GAAGACACGC TGCGCGCGGC CGACCTGGTC
CTGATGCAGA TGGAGGTTCC GCGCGAGACG GTGCTCCATA CGGTGCGGCG GGCGGCGGAA
TGGGGCGTGC GCACCATCCT GAACCCGGCG CCGGCCGCGG CCGATCTCAA CGTGGACGAC
CTGCGCGATC TGAGTTTCCT CGTCCCGAAC GAGAGCGAGC TGGCGCTGCT CTCGGGCCTG
CCCACCGGCA GCGAGGAAGA GATCGAGGCC GCCGCGCGCA GTCTGATCGC CCGCGGCATC
GGCACGGTGA TCGTGACGCT CGGCGGCCGC GGCGCGCGGC TTGTGACCGG CGAGGGCGTG
GTGCGGATCC CGGCCGTCCG CGTGACCCCG GTGGACACGA CCGGCGCCGG AGACGCCTTC
ATCGGCGCCT TCGCCCATTT CCTCGCGGCC ACCGGCGATG TCGAGGGCGC TCTCACGCAG
GCGGCGTGCT ATGCCGCCCA TTCCGTGACC GGGCGCGGCA CCCAGAAATC CTACGCGACG
GCCGAGGTCT TCGCGGACTT CTGCCGCTCG CTCCCCCCAT CCGCATGA
|
|---|
| Protein sequence | MSATKPGRIA VVGSNMVDLV TYITRMPAPG ETVEAPDFEI GPGGKGANQA VAAARLGSQV
AMVTKVGGDI FGENTRRNLA EQGIDTTHVG TVPGKSSGVA PIFVDPQGEN SILIVKGANA
DLSPADVDAA EDTLRAADLV LMQMEVPRET VLHTVRRAAE WGVRTILNPA PAAADLNVDD
LRDLSFLVPN ESELALLSGL PTGSEEEIEA AARSLIARGI GTVIVTLGGR GARLVTGEGV
VRIPAVRVTP VDTTGAGDAF IGAFAHFLAA TGDVEGALTQ AACYAAHSVT GRGTQKSYAT
AEVFADFCRS LPPSA
|
|---|
| |