| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3341 |
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| Symbol | |
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| ID | 5085832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 218228 |
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| End bp | 219202 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640484910 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169527 |
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| Protein GI | 146279369 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.699949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.164593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGA AATCCCTCAC GCTTGCAGCC CTGCTCGGCG CTGCCGCCGT TCTGCCTGCC
GCAGCGCAGG AAGTGGTGGT GCGCGTGGCC TACGAGAACA ATCCCGGCGA GCCGACCGAC
CTCGTGATGA ACCGCTGGGC CGAGCTGGTT GCCGAAGCCT CGGACGGCAA CGTGGCGCTC
GAGCTCTATC CCTCGTCGCA GCTGGGCGCC AAGCAGGACG TGATCGAGCA GGGCCTGCTG
GGCGTCAACG TCATCACGAT CGCCGACGTG GGGTTCCTGA CCGACTATGA TCCCGATCTC
GGCATCCTCT TCGGGCCCTA TCTGACCGAC AGCCCCGAGC AGCTCTTCAA GATCTACGAG
AGCGACTGGT TCAAGGAGAA GGAAGCCGCG CTGCGCGAGA AGGGCGTGCA TATCGTCATC
TCGAACTACC TCTACGGCAC CCGGCAGCTT CTGGCGAAGA AGAAGGTCGA GACGCCGGAC
GATCTGGCCG GGATGAAGGT CCGCGTGCCC AACAACATCA TGCAGATCAA GGCGCTCGAA
CTGATGGGTG CCACGCCGAC GCCGATGCCG CTGGGCGATG TCTATCCGGC GCTGACCCAG
GGCGTCATCG ACGGCGTCGA GAACCCGCTG CCGGTGCTCT ATGGCGGCAA GTTCCACGAG
CAGGCCAAGG AGCTGTCGAT GATCAGCTAC CTGACCAACA CCTCGCTCTG GCTGGGCGGC
GAGGCCTATT TCTCGACCCT CGACCCCGAG GTGGTGACCA TGCTGCATGA GACGGGCCAT
CAGGCCGGCC TCTACAGCCA GGAGCTGGCG GCGCAGGAAG AGGGCAAGAT GATCGAAGCG
ATGAAGGCCG CCGGCGTGAC GGTGACCGAG CCCGACGTCG AGGCCTTCCG CGAAAAGACC
AAGGCCTTCT ACACCATGTT CCCGGAATGG TCCGAGGGGC TATACGAGCA GATCCAGGCG
GCTCTCGCCC AGTGA
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| Protein sequence | MTLKSLTLAA LLGAAAVLPA AAQEVVVRVA YENNPGEPTD LVMNRWAELV AEASDGNVAL
ELYPSSQLGA KQDVIEQGLL GVNVITIADV GFLTDYDPDL GILFGPYLTD SPEQLFKIYE
SDWFKEKEAA LREKGVHIVI SNYLYGTRQL LAKKKVETPD DLAGMKVRVP NNIMQIKALE
LMGATPTPMP LGDVYPALTQ GVIDGVENPL PVLYGGKFHE QAKELSMISY LTNTSLWLGG
EAYFSTLDPE VVTMLHETGH QAGLYSQELA AQEEGKMIEA MKAAGVTVTE PDVEAFREKT
KAFYTMFPEW SEGLYEQIQA ALAQ
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