Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3326 |
Symbol | |
ID | 5085817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 199363 |
End bp | 200265 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640484895 |
Product | hypothetical protein |
Protein accession | YP_001169512 |
Protein GI | 146279354 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.128315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCC GCCGTTTCCT GTCGATCAGC GCCGCGGCCT TCGTGGCCGG TCCGGCACTT GCCGCGCCCG CGCTGACGCG GATCCGCGGG AAGGCCCTCG GGACCGGCGT GCAGATCCTG CTCGCCCATC CCGACGCCGA TGCCATGGGC CGGCGCGCGC TGGCCGAGAT CGCGCGGCTC GAGGCGATCT TCAGCCTTCA CCGCGAGTCG GATCTCGCGC GCCTCAACCG CGCGGGCCAT ATCCCCGCGC CCCCGCCCGA ACTGCTGGAC TGCCTGAGCC TTGCGGCGCA TCTGCATCAG GCGACGGGCG GCCTCTTCGA TCCGACGATC CAGCCGCTCT GGCGTCTCCA TGCCGAGCGT CATGCGGCCG GCGCACCGCC CTCGGCCTCG GAAATCGCCG CTGCGCAGAG GCTGGTCGGC TGGGAGAGGG TGGAGTTCGG AACCGACGGC GTCCGTCTAG CGCCGGGGAT GGCGCTGACG CTGAACGGGA TCGCGCAGGG CTACATCGCG GACCGCATCG CGGCCCTTCT CGGCGCCGAG GGCCTGACGG ATGTGCTGGT CGATACCGGA GAGCTTGTCG CGCCGGGGGT TCAGCCGGAC GGAAGAGGCT GGCCCGTGGC GCTGGCCGGG GGGCAGGGAA GCGTGATGCT CCGACAGGCG GCGCTGGCGA GTTCCGCGCC GCTGGGGACC ACCTTCGACG CTCTGGGCGC GGCGGGGCAC ATCCTCGATC CGCGGACGGG CACGCCGGCG CCCGCGCGGT GGCGGCTTGT CAGCGTGACC GCCCCGAGCG CGGCGGTGGC GGATGCCGCA AGCACCGCCT TCTGCCTGAT GGACCGGCAG GAGATCGGGC AGGCCCTGAG GGCGCTGCCG TCCTGTCACA TCATCGCCCT GCGCGCGGCC TGA
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Protein sequence | MNRRRFLSIS AAAFVAGPAL AAPALTRIRG KALGTGVQIL LAHPDADAMG RRALAEIARL EAIFSLHRES DLARLNRAGH IPAPPPELLD CLSLAAHLHQ ATGGLFDPTI QPLWRLHAER HAAGAPPSAS EIAAAQRLVG WERVEFGTDG VRLAPGMALT LNGIAQGYIA DRIAALLGAE GLTDVLVDTG ELVAPGVQPD GRGWPVALAG GQGSVMLRQA ALASSAPLGT TFDALGAAGH ILDPRTGTPA PARWRLVSVT APSAAVADAA STAFCLMDRQ EIGQALRALP SCHIIALRAA
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