Gene Rsph17025_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3297 
Symbol 
ID5085788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp169936 
End bp170775 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content71% 
IMG OID640484869 
Productresponse regulator receiver protein 
Protein accessionYP_001169486 
Protein GI146279328 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.402229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.818338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCG ACGCACGCCC CTGCACCCTC GGCGAAGGCG CCTTCTGGCA CCCCGAGCGG 
CGCGAGCCCT TCTGGTTCGA CATCGCCGCC GGCAAGCTCC TTGCCCGGAT CCGCAACGAG
CCCGCCGAAT GGAGCTTTGG CGAAGCCGTG TCGGCTGCGG GCTGGATCGA CCGGGACCGG
CTGCTGATCG CGTCCGAAAC CGGCCTCTGG CGGTTCGCGA TAGAGACGGG GCAGCGGGAG
CGGATCGTGG CTCTGGAAGA GGATTGCTCC GGCACGCGCT CGAACGACGG GCGGACCGAT
CCGGCGGGCG GCTTCTGGAT CTCGACCATG GGAAAGGACG CCGAGTCCGG CGCGGGGGCG
ATCTACCGCT TCCACGAGGG GCGCATCAGC CGGCTCTTTG CCAACCTCAC CATCCCGAAC
GCGATCTGCT TTGCCCCCGA TGGCCGTCGC GCCTACTTTG CGGACACGCC GCGCTCGTGT
CTCATGACGG TGGCGCTGGA CGCAGAGGGC TGGCCGCTGG GGGAGCCGGC CCTCTTCGCA
CACCTTCCGG GCCTGTCGCC CGACGGGGCC GTCACCGACG CCGAGGGCGG CATCTGGAGC
GCGCAGTGGG GGGCGGGCCG CGTCGCCCGT TACCGGCCCG ACGGGCGCTT CGATCGCGCG
CTCGATCTGC CTGCCCCACA GGTGACCTGT CCCTGCCTCA CCGAAGGCGG CCGCATGATC
GTCACCTCGG CCCGCGAGGG CATGAGCGAG GCCGCCCTGA TGGACCATCC GCTTTCAGGG
CAGACGTTCG AGCTGGAGGC GGGGGTCGAA GGGGTTCCTG CGCCGCGCCT CAGGCTCTGA
 
Protein sequence
MILDARPCTL GEGAFWHPER REPFWFDIAA GKLLARIRNE PAEWSFGEAV SAAGWIDRDR 
LLIASETGLW RFAIETGQRE RIVALEEDCS GTRSNDGRTD PAGGFWISTM GKDAESGAGA
IYRFHEGRIS RLFANLTIPN AICFAPDGRR AYFADTPRSC LMTVALDAEG WPLGEPALFA
HLPGLSPDGA VTDAEGGIWS AQWGAGRVAR YRPDGRFDRA LDLPAPQVTC PCLTEGGRMI
VTSAREGMSE AALMDHPLSG QTFELEAGVE GVPAPRLRL