Gene Rsph17025_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3250 
Symbol 
ID5085999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp118027 
End bp119082 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content72% 
IMG OID640484822 
Productselenophosphate synthetase 
Protein accessionYP_001169439 
Protein GI146279281 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0709] Selenophosphate synthase 
TIGRFAM ID[TIGR00476] selenium donor protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.433054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.299232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA GACCACCGAC CGAACCGAGG CTCACGTCGC TGGCCCACGG AGGCGGGTGC 
GGCTGCAAGA TCGCGCCCGG CATCCTTTCG GACCTGCTGC GCGCGGCGCC GGCCCTGCCG
GTCCCCGAGG ATCTGCTGGT GGGCACCGCC ACCTCAGACG ATGCCGCGGT CTGGCGCCTG
AACGACGAGC AGGCGCTGGT GGCCACGACC GACTTCTTCA TGCCGATTGT GGATGACCCG
TTCGACTTCG GCCGGATTGC CGCCACCAAC GCGATCAGCG ACGTCTATGC GATGGGCGGG
CGGCCCATCA TGGCCCTGGC GCTGGTGGGA ATGCCGATCA ACGTCCTGTC GAGGGAGACC
ATCGGGCGCA TCCTCGAAGG CGGCGCCACG GCCTGCGCGG CGGCGGGCAT CCCGGTGGCG
GGCGGGCACA CGATCGACTC GGTCGAGCCG ATCTACGGCT TGGTGGCACT CGGCCTCGTG
CATCCCGAGC GGGTGCGGAG CAACGCCGGT GCGCGGCCGG GCGACCGGCT CATTCTGGGC
AAGCCGATCG GCACCGGCAT CCTCTCGGCG GCCCTGAAGA AGGGCGAACT CGACGCGGCG
GGCTATGCCG AAATGATCGC CACCACCACC CGCCTCAACA CGCCGGGCCC GGATCTGGCG
GCGCTGGCGG GGGTTCACGC GCTGACCGAT GTCACGGGCT TCGGGCTTGG CGGTCACGCC
ATCGAGATGG CCCGCGGGGC CGGGTGCGAG TTGCGGATAG ACTGGGACCG CGTGCCCGTC
ATGCCGCCGG TGCGCGGGCT TGTCGGGCGC GGCTTCGTCA CCGGAGCGTC GGGCCGCAAC
TGGGACAGCT ACGGCGCGGG CGTGGCCCTC CCCGAGGATT TCCCGCCCGG AGAACGCGCC
CTGCTGACCG ATCCGCAGAC GAGCGGCGGG CTGCTCGTCT CCTGCGCCGA GGACGCGGTG
GCGGAGGTGC TGGCCATCTT CGCCCGGCAC GGGTTCGAGG CGGCGACCGA GATCGGCGGC
GTGGCCGAGG GTCCGGCGCG GGTCGTGCTG CGCTGA
 
Protein sequence
MTDRPPTEPR LTSLAHGGGC GCKIAPGILS DLLRAAPALP VPEDLLVGTA TSDDAAVWRL 
NDEQALVATT DFFMPIVDDP FDFGRIAATN AISDVYAMGG RPIMALALVG MPINVLSRET
IGRILEGGAT ACAAAGIPVA GGHTIDSVEP IYGLVALGLV HPERVRSNAG ARPGDRLILG
KPIGTGILSA ALKKGELDAA GYAEMIATTT RLNTPGPDLA ALAGVHALTD VTGFGLGGHA
IEMARGAGCE LRIDWDRVPV MPPVRGLVGR GFVTGASGRN WDSYGAGVAL PEDFPPGERA
LLTDPQTSGG LLVSCAEDAV AEVLAIFARH GFEAATEIGG VAEGPARVVL R