Gene Rsph17025_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3212 
Symbol 
ID5085961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp73805 
End bp74827 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content71% 
IMG OID640484784 
Producthypothetical protein 
Protein accessionYP_001169401 
Protein GI146279243 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCG CGCTGGACAG TCTGGATGAC CTCGCCACCC TTGGCCTTGT CGATCCGGCC 
GAGGAGCGGC TGGCCGAGGT GGCGCGCGCC TTCCGCATCC GCGTGACATC CCAGATGGCC
GCCGCCGCCG CGGATCCTGC CGTCGCGCGC CAGTTCGTGC CCACGGTGGA CGAGCTGGAG
ATCCGCCCGG AAGAGCTTGC CGATCCCATC GGCGACGAGG CGCGAAGCCC GGTGCCGGGC
CTCACCCACC GATACACGGA CCGCGTGATC CTGCATGTCA CGCGCACCTG CGATGTCTAT
TGCCGCTTCT GCTTCCGCCG CGAGGTCGTG GGCAGCGAGG GCCTCCTGTC GGATGCGGAC
TTGACCGCCG CGCTCGACTA CATCGAGGCC ACGCCCGCGG TTCGCGAGGT GATCCTGACG
GGGGGCGACC CGCTGACCCT CTCTCCGCGG CGGCTGCGCG GGATCATCGA GCGGCTCGGG
CAGATCGCTC ACCTCGATCA GGTGCGCATT CACAGCCGCG TGCCGGTCGT GGCCCCGCAA
CGGGTGGACG AGGACATGAT CCGTGCCCTG CTGGGGCCCG TACCGGTCTG GATCGTGGTT
CATGTCAACC ACGCGGCCGA GCTGCGGCTC GACGCGCGCG CGGCGCTGGG GCGGCTTGCC
GATCGTGGCG TGCCACTGCT GTCGCAATCG GTTCTTCTGC GCGGCGTGAA TGACAGCGCG
GACACGCTCG AGGCTCTGTT CCGCGCGCTC CTCCGGCTGC GGGTCAAGCC CTACTACCTG
CATCATTGCG ACCTCGCCCG CGGGGCCGGC CACTTCCGCA CCTCGATCGC GCAGGGGCGC
GCGATCATGG CCGAGCTGCG GCGGAGGATC ACGGGGATCG GCTTGCCGAC CTATGTGCTC
GACATCCCCG GAGGCTTCGG CAAGGTGCCG GTCACGCCCG ACCATGTCAT CCCCGACGGC
CCCGGGCGCT GGCAGGTCCG CGACCCGCAG GGCGGCGTGC ACCGCTACGA GGACCCTGCC
TGA
 
Protein sequence
MDRALDSLDD LATLGLVDPA EERLAEVARA FRIRVTSQMA AAAADPAVAR QFVPTVDELE 
IRPEELADPI GDEARSPVPG LTHRYTDRVI LHVTRTCDVY CRFCFRREVV GSEGLLSDAD
LTAALDYIEA TPAVREVILT GGDPLTLSPR RLRGIIERLG QIAHLDQVRI HSRVPVVAPQ
RVDEDMIRAL LGPVPVWIVV HVNHAAELRL DARAALGRLA DRGVPLLSQS VLLRGVNDSA
DTLEALFRAL LRLRVKPYYL HHCDLARGAG HFRTSIAQGR AIMAELRRRI TGIGLPTYVL
DIPGGFGKVP VTPDHVIPDG PGRWQVRDPQ GGVHRYEDPA