| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3207 |
|---|
| Symbol | |
|---|
| ID | 5085956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 68054 |
|---|
| End bp | 70090 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640484779 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169396 |
|---|
| Protein GI | 146279238 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.519422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACG ACCCGCTCCT CCAGCCCTAC CGCCTGAAGC ATCTTGTCCT TCGCAACCGC
ATCCTCATCA CCAGCCACGA ACCCGCCTAC CCGGAGGACG GCATGCCCAA GGACCGTTAC
CGCGCCTATC ACGTCGAACG GGCGCGGGCG GGCGTGGCGC TGACCATGAC GGCGGGCTCG
GCCAGCGTGT CGCGAGACAG CCCGCCCGTC TTCAACAACA TCCTCGCCTG GAAGGACGAG
GTCGTGGGCT GGATGAAAAG GCTTTCCGAC GAATGCCACG ACCACGGCGC GGCGGTAATG
ATCCAGCTCA CCCACCTCGG TCGAAGGACG CGCTGGGACA AGGGCGACTG GCTGCCCGTG
GTGGCGCCCA GCCATGAGCG TGAGGCCGCG CACCGCGCCT TTCCCAAGCG GATCGAGGAG
TGGGACATTG CCCGCATCAT CGGCGACTTC GCCGACGCCG CCGACCGGAT GAAGGAGGCC
GGCCTCGACG GCATCGAACT CGAAGCCTAC GGTCACCTGC TCGAGCAGTT CTGGTCCCCC
TTGACCAACG ATCTGGAGGA GCCCTGGGGC GGCAGCCTCG ACAACCGCCT CCGCTTCACC
TTCGAGGTGC TTCGGGCGAT CCGCGAACGG GTGGGGCCGG ACTTCATCGT GGGCGTGCGC
TACACCGGCG ATCAGGATCT GCCCGGCGGG ATGCGCGCGG CCGAGGGGCT CGAGGTCTCG
CGCAAGCTTA AGGAAAGTGG CCTTGTGGAC TTTCTCAATG TCGTCAGGGG GCATATCGAC
ACCGATCCCG GCCTCACCGA CCTGATCCCG ATCCAGGGGA TGCGCAGCGC GCCGCACCTC
GACTTCGCCG GTGAGATCCG CGCGGCGACG AATTTCCCCA CCTTCCACGC CGCCCGGATA
CCCGACGTGG CCACCGCCCG GCACGCCATT GCCAGCGGCA AGCTCGACAT GGTGGGAATG
ACGCGCGCGC ATCTGGCGGA TCCGCATCTG GTGCGCAAGA TCATCGAAGG CCGCGAGGCG
GACATCCGGC CCTGCGTCGG CGCCAACTAC TGCCTCGACC GGATCTATCA GGGCGGCATG
GCGCTCTGCC TGCACAACCC CTCGACCGGG CGCGAGATCG AGCAGCCGCA CGAGATTGCG
AAGGCCACGG TGAAAAAACG TATCACCATA ATCGGCGCAG GCCCTGGCGG GTTGGAGGCC
GCGCGCGTGG CGGCCGAACG GGGCCATGAT GTGACCGTGT TCGAGGCAGC GCCCGAACCG
GGCGGTCAGG TGCGCCTGAC GGCGTTGCAG GACCGGCGGC GCGAGATGAT CTCCATCATC
GACTGGCGCA TGGAGCAATG CGGGAAACTT GGCGTGCACT TCCATTTCAG CACGGTGGCC
GACGGCGCCG CGGTGCTGGC GACCGACCCG GAAGAGGTCA TCCTGGCCAC GGGCGGGCTG
CCGCATACCG AGGTTCTGTC GCATGGCAAT GATCTGGTCT GCTCGGCCTG GGACATCCTT
TCGGGCGATG TGAAGCCGGG GGTGCAGGTC CTGATCTTCG ACGACGCGGG CGACCATGCG
GGCCTGCAGG CCGCCGATGC CATCGCCGGA ACCGGAAGCG CGGTCGAGAT CGTCACACCC
GACCGCAGCT TTGCGCCGGA AGTGATGGCC ATGAACCTCG TGCCCTACGT CCGCAGGCTC
CAGACCCGCG ATGTGACGTT TACCGTCACC TGGCGCCTGA TCGAGGTGCA CAGGGAAGGC
AACCGGCTGC GGGCGGTGCT CGGCAGCGAC TATGGCGGGG TCCGCCGCGA GCGGCTGGTC
GATCAGGTCG TCGTGAACCA CGGGACACGC CCGCTGGACG AGTTGTATTT CGAGTTGAAG
CCGCTGTCGT CCAACCTCGG CGAGGTGGAT TACGAGGCCC TCGCCACCTC CCGTCCTCAG
GGCGTCAGCC GTAATCCGGC GGGGCGCTTC CGGTTGTTTC GGATCGGCGA TGCGGTGTCG
GCCCGCAACA CCCATGCCGC GATCTACGAC GCGTTGAGGC TGGCCCGCGA TCTGTGA
|
|---|
| Protein sequence | MSNDPLLQPY RLKHLVLRNR ILITSHEPAY PEDGMPKDRY RAYHVERARA GVALTMTAGS
ASVSRDSPPV FNNILAWKDE VVGWMKRLSD ECHDHGAAVM IQLTHLGRRT RWDKGDWLPV
VAPSHEREAA HRAFPKRIEE WDIARIIGDF ADAADRMKEA GLDGIELEAY GHLLEQFWSP
LTNDLEEPWG GSLDNRLRFT FEVLRAIRER VGPDFIVGVR YTGDQDLPGG MRAAEGLEVS
RKLKESGLVD FLNVVRGHID TDPGLTDLIP IQGMRSAPHL DFAGEIRAAT NFPTFHAARI
PDVATARHAI ASGKLDMVGM TRAHLADPHL VRKIIEGREA DIRPCVGANY CLDRIYQGGM
ALCLHNPSTG REIEQPHEIA KATVKKRITI IGAGPGGLEA ARVAAERGHD VTVFEAAPEP
GGQVRLTALQ DRRREMISII DWRMEQCGKL GVHFHFSTVA DGAAVLATDP EEVILATGGL
PHTEVLSHGN DLVCSAWDIL SGDVKPGVQV LIFDDAGDHA GLQAADAIAG TGSAVEIVTP
DRSFAPEVMA MNLVPYVRRL QTRDVTFTVT WRLIEVHREG NRLRAVLGSD YGGVRRERLV
DQVVVNHGTR PLDELYFELK PLSSNLGEVD YEALATSRPQ GVSRNPAGRF RLFRIGDAVS
ARNTHAAIYD ALRLARDL
|
|---|
| |