| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3197 |
|---|
| Symbol | |
|---|
| ID | 5085946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 58931 |
|---|
| End bp | 59665 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640484769 |
|---|
| Product | electron transport complex RsxE subunit |
|---|
| Protein accession | YP_001169386 |
|---|
| Protein GI | 146279228 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
|---|
| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.113387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA GCTACGGCAA GATCGCCCGC GACGGGCTCT GGGACAAGAA CATCGTCTTC
GGACAGATGC TCGCGCTCTG CCCGGCGCTG GCCATCACCG GCACGGCGAC GAACGGCCTC
GGGATGGGGC TTGCCACCAC CGCCGTGCTG ATCGTGTCGA ACGTGGCCAT CTCGGCGCTG
CGCCGCGTCA TCGCGCCCGA GATACGGATC CCGGTCTTCG TCCTCATCAT CGCCTGCATC
GTGACGGTGG TGGATCTCGC CCTCAACGCC TGGGTGCATG ACCTGCACAA GGTCCTGGGC
CTGTTCATCG CGCTGATCGT GACGAACTGC GCCATTCTGG GCCGAGCCGA GGCCTTCGCC
TCGCGCAAGG GGGTGGCAGT CTCGGCCTTC GACGGGCTGA CGATGGGCGC GGGCTTCACG
CTGGCGCTGA TGCTGGTGGG GGCGCTGCGC GAGATCCTGG GCTCTGGCAC GCTCTTCGCG
CAGGCCTCGG TGCTGCTGGG ATCGCAGTTC GCCTTCCTGG AGCTTACGCT CTTCCCCGAT
TATCCGGGCT TCCTGCTGGC GATCCTGCCG CCCGGCGGGT TCATCCTCGT GGGGATCCTG
CTCGCGCTCA AGTCGCTCAT CGACAGCCGC GGGAAGAGCC TCGAGCAGGA GATCAAGGAG
ATGCGCGTCG AGCGCGTCTT CACGGCCGCG GGGGTGCTGA AACCCAGGCT GCAGGCCGCG
GAGGATGACG AATGA
|
|---|
| Protein sequence | MSDSYGKIAR DGLWDKNIVF GQMLALCPAL AITGTATNGL GMGLATTAVL IVSNVAISAL
RRVIAPEIRI PVFVLIIACI VTVVDLALNA WVHDLHKVLG LFIALIVTNC AILGRAEAFA
SRKGVAVSAF DGLTMGAGFT LALMLVGALR EILGSGTLFA QASVLLGSQF AFLELTLFPD
YPGFLLAILP PGGFILVGIL LALKSLIDSR GKSLEQEIKE MRVERVFTAA GVLKPRLQAA
EDDE
|
|---|
| |