Gene Rsph17025_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3196 
Symbol 
ID5085945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp58254 
End bp58916 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID640484768 
ProductRnfA-Nqr electron transport subunit 
Protein accessionYP_001169385 
Protein GI146279227 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID[TIGR01947] electron transport complex, RnfABCDGE type, G subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.401599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG CCGACCCTGC CGCGCCCCCT TCCAAGGCCG GGACCTCCGG GTGGAAGACC 
TCGCCCGTCG TCCTGGGCCT GATGCTCGGG TTCTTCTCGC TCTTCTCGGC GCTGCTGCTC
GCCTTTGCCA ATGACGTGAC CCGCGCGCCC ATCGCCGCCC GTGCGGCCGA GGATCTGCTG
GCCTCGCTCG CGCAGGTGCT GCCGGGGGAG TTGCATGACA ATGATCCGAC CGCCGACATC
CGGCTGCTTT CGGATGCCGA GGAAGGGCGG GTGCGGGTCC ATGTCGCCGC CCGCGCGGGC
GAGGTGACGG GGCTTGCCTA CGAGTTGACC GGCTACGGCT ACAGCGGGGC CATCCGCGTG
CTGATGGCCC TTGCGCCCGA CGGCACGATC CTCGGGGTGC GGGTGCTGTC GCACACCGAG
ACGCCCGGCC TGGGCGACAA GATCGAGATC GGCAAGAGCG ACTGGATCGC GGGTTTCTCG
GGCCGCTCGC TCGCAGACCC CGGCCCGGAC GGCTGGAAGG TCCGGCGCGA CGGCGGCGTG
TTCGACCAGT TCTCCGGCGC GACGATCACC CCGCGCGCCG TGGTGGCCAC GATCCGCCGC
GGCCTTGACC TGTTCGAGCG TCACCGCGCG GAGCTTCTCG CACCGCTTCC AGCAAGGTCC
TGA
 
Protein sequence
MSQADPAAPP SKAGTSGWKT SPVVLGLMLG FFSLFSALLL AFANDVTRAP IAARAAEDLL 
ASLAQVLPGE LHDNDPTADI RLLSDAEEGR VRVHVAARAG EVTGLAYELT GYGYSGAIRV
LMALAPDGTI LGVRVLSHTE TPGLGDKIEI GKSDWIAGFS GRSLADPGPD GWKVRRDGGV
FDQFSGATIT PRAVVATIRR GLDLFERHRA ELLAPLPARS