Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3168 |
Symbol | |
ID | 5085653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 30839 |
End bp | 31315 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484740 |
Product | hypothetical protein |
Protein accession | YP_001169357 |
Protein GI | 146279199 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.254618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.523105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGG ACCCGATCGA CCTGCGCATC CTCGAGGCCG TCCAGAGGGA GGGGCGGATC ACCAAGCTGC GGCTCGCCGA GGCGGTGGGC CTGTCGCCCA CACCCTGCTG GCTGCGCCTG CGCAAGCTGG AGCAGGCGGG GCTGATCGCG GGCTATCACG CCCGGCTCGC GCCGCGCCGC GTGGCCCCCT TCGCGACCGT GCTGGTCGAG GTGACGCTGG CCAACCACCG GCAGTCCGAC TTCGACCGGT TCGAGCGCGC GGTCTCGGCC CGCGACGAGG TTCTGGCCTG CTGGTCGGTG GGCGGCGGGG TGGATTACAT CCTGAAGGTC GTGGCGCGCG ACATCGACGC CTATCAGCGG CTGATCGACG GGCTTCTGGC CGACGAGATC GGGATCGACC GCTATTTCAC CTACATCGTC ACCCGCACCG TCAAGGAGGA CGGCCCGCTG CCGATGGCGC TTTTCGCCGG CCCGTAG
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Protein sequence | MKLDPIDLRI LEAVQREGRI TKLRLAEAVG LSPTPCWLRL RKLEQAGLIA GYHARLAPRR VAPFATVLVE VTLANHRQSD FDRFERAVSA RDEVLACWSV GGGVDYILKV VARDIDAYQR LIDGLLADEI GIDRYFTYIV TRTVKEDGPL PMALFAGP
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