| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3131 |
|---|
| Symbol | |
|---|
| ID | 5083329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3206566 |
|---|
| End bp | 3207228 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484703 |
|---|
| Product | alanine racemase domain-containing protein |
|---|
| Protein accession | YP_001169320 |
|---|
| Protein GI | 146279161 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.803662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000192693 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGA CGATCCTGAA CCGCATCGCC GAGGCCGAGA AGGCCGCGGG CCGCGCACCC
GGCTCGGTCG AGCTGATCGC GGTCTCGAAG GTGCAGCCGC TCGACCGCGT GGTGGCGGTG
CTCGAGGCGG GTCACCGGAT CTTCGGCGAG AACTACGTCC AGGAGGCGCA GGGCAAGTGG
CCCGAGCTGA GGGCGCGGTT CGGGCGCCTC TCGATCCACA TGATCGGGCC GTTGCAGACC
AACAAGGCCA AGGCCGCCGT CGGGCTTTTC GACGCGATCC ACACGCTCGA CCGGCCGTCG
CTCGCCGACA AGCTGGCCCG TCTCGCGCAG GAGCGCGGCG CCTCGCCCGA ACTGTTCGTG
CAGGTAAACA CGGGCGAAGA GCCGCAGAAG GCCGGCGTCC TGCCCGCCGA CGCCGACGGC
TTCATCGCCA CCTGCCGCAG CATGGATCTG CCGGTCCGCG GCCTCATGTG CATCCCGCCC
GAGGGCGAGG ACAGCGCGCC CCACTTCGCC CAGCTGGCCG CGATCGCCGA TCGGAACGGG
CTCGGCGGCC TGTCGATGGG CATGAGCGGC GACTTCGAGG CGGCCATCGC CGCGGGCGCG
ACCCATGTCC GCGTGGGATC GGCCATCTTC GGCGCGCGCG ACTACACGGC CGGCCGGGCC
TGA
|
|---|
| Protein sequence | MLETILNRIA EAEKAAGRAP GSVELIAVSK VQPLDRVVAV LEAGHRIFGE NYVQEAQGKW
PELRARFGRL SIHMIGPLQT NKAKAAVGLF DAIHTLDRPS LADKLARLAQ ERGASPELFV
QVNTGEEPQK AGVLPADADG FIATCRSMDL PVRGLMCIPP EGEDSAPHFA QLAAIADRNG
LGGLSMGMSG DFEAAIAAGA THVRVGSAIF GARDYTAGRA
|
|---|
| |