Gene Rsph17025_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3130 
Symbol 
ID5083328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3206067 
End bp3206561 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content72% 
IMG OID640484702 
Producthypothetical protein 
Protein accessionYP_001169319 
Protein GI146279160 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00016542 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGATC TGGTGGTCAC TCGCCGGGGT GCGCACTTCG GGCGCCGGTT CCTGCCCTGC 
TCGATCGGGC GGGGCGGCAT CACCGGGGAC AAGCGCGAGG GAGACGGGGC CACGCCGCGC
GGCACGCACC GCATCGCCGG GCTGCTCTAT CGGCCGGACC GGGTGGCGGC CTCGGAGCTG
CCCGACTGGG CCCAGCCTTT CGGGCCGTCG GACCTGTGGT CGGATGATCC GCGCGACGTG
GATTACAACC AGCTGGTGCG CGCGCCCCAC CGCTACGGGC ATGAACGGCT GAGCCGCGCC
GACCCGCTTT ATGACGTGAT CCTGCTCACC GACTGGAATT GGCCCGAGGC GGTGCCGGGC
CGCGGCTCGG CAATCTTCCT GCACACATGG CGGCGGCCGC GCCATCCGAC GGCGGGCTGC
GTGGCCTTTT CCCGCTCCGA CCTGCTGTGG CTCGCGCACC GCCTGACGCC CGAGAGCCGG
CTGGTCGTGC GCTGA
 
Protein sequence
MTDLVVTRRG AHFGRRFLPC SIGRGGITGD KREGDGATPR GTHRIAGLLY RPDRVAASEL 
PDWAQPFGPS DLWSDDPRDV DYNQLVRAPH RYGHERLSRA DPLYDVILLT DWNWPEAVPG
RGSAIFLHTW RRPRHPTAGC VAFSRSDLLW LAHRLTPESR LVVR