Gene Rsph17025_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3126 
Symbol 
ID5083324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3202415 
End bp3203038 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content68% 
IMG OID640484698 
ProductTetR family transcriptional regulator 
Protein accessionYP_001169315 
Protein GI146279156 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.333802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00150199 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGCCG ACACGATCCC GCTTCGCAAG GGCCGCAAGA TGCCACAGGT GCTCGAGGGC 
GCCCGGAAGG TGTTCCTGCG CGACGGGTTC GAGGGGGCGA GCGTCGATGA CATCGCGCGC
GAGGCGGGCG TGTCCAAGGC GACGCTCTAC AGCTACTTTC CCGACAAGCG GCTTCTTTTT
CTGGAGGTCG CCAAGGCCGA GTGCCTGCGG CAGGCCGAAG AGGCCGTGGC GCTGATCACC
TCCGACCTCG GCCCGCGCGA GGTTCTGACG ATGGCGGCCA CTCGCATCGT CGATTTCGTG
CTGTCCGACT TCGGGATTCG CACCTACCGG ATCTGCGTGG CCGAGGCCGA CAGGTTCCTC
GAACTCGGGC ACGAGTTCTA CGAGAGCGGG CCGGCCCTCG TCCGCCAGAG GATCGTGGAT
TACCTGCGGC AGGCCGTGGC GCGGCATGAG CTGATCATCG AAGATCTCGA GCTTGCCGCC
GACCAGTTCG CCGAGCTGTG CAAGGCCGAC CTCTTCAACC GCATCGTCTT CGGCGTGGGC
GCGGCGGTGA GTGCCGGGGA GCGGCGCCGG GTGGTGGCCG GAGCGGTCGA GATGTTCCTC
GCCCGCTACG CGCCGAAGGG CTGA
 
Protein sequence
MPADTIPLRK GRKMPQVLEG ARKVFLRDGF EGASVDDIAR EAGVSKATLY SYFPDKRLLF 
LEVAKAECLR QAEEAVALIT SDLGPREVLT MAATRIVDFV LSDFGIRTYR ICVAEADRFL
ELGHEFYESG PALVRQRIVD YLRQAVARHE LIIEDLELAA DQFAELCKAD LFNRIVFGVG
AAVSAGERRR VVAGAVEMFL ARYAPKG