| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3102 |
|---|
| Symbol | |
|---|
| ID | 5083300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3179159 |
|---|
| End bp | 3181126 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484674 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169291 |
|---|
| Protein GI | 146279132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.68141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.107448 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGCC TCGCGCGGGC CCGCCTCATG CGGCCCTCTG CACCTTGCCC CGGCGCCGCC
CAGGCCCTAG ACAGTCGCAA CCGCCCAAAC CGGAAGAATG CCATGTCGAG ACTGACGTCG
ATCGAGCACC ACAAGCCGAA GAAGAAGGGC ACGCAGATCG TGTTCTGGGG CCTCGTCGCC
CTGATGGCCG TGGGCCTCGG CGGCTTTGGC GTGACCAATT TCGGCGGCGG GCTCAGCACC
GTCGGCAGCG TCGGCGACCG CGACATCACC ACCGCCGACT ATGCCCGCGC GCTTCAGCAG
GAGATGCGGG CGCTCGGGGC GCAGATCAAC CAGCCGGTCA CGATGGAAAT GGCGCGGGCG
TTCGGGCTCG ACCAGCAGGT GCGCCGCCGC CTCGTGACGC AGGCCGCGCT GTCCAACGAA
GCCGACCGTG TCGGCCTGTC GGTGGGCGAT GCGCGGGTGG CCGAGGAGAT CACCGGCTCG
GACTCCTTCC ACGGTCCCTC GGGGCAGTTC GACCGCGAGA CCTACCGGCT GGTGCTGCGC
CAGAACAACC TTTCCGAATC CGAGTTCGAG AACGGCCTGC GCGAGGATAT CTCGCGCTCG
CTGCTGCAGG GCGCGGTGGG GGGCGGCTTC GTGGCGCCCG CGGCGCTGGT GGACACGCTG
CACGCCTACA TCGCCGAGCG GCGCAGCTTC AGCCTGCTGC GGGTGCAGGA GGCCAACCTC
GGCGCGCCGC TGCCCGAACC CACCGAGGAC GAGCTTCAGG CGTGGTATGA GGCGCATCCG
GCCGATTTCA CCGCCCCGGA ACGCAAGCGC ATCACCTACG CCGCCCTGCT GCCGCAGGAG
GTGGCCCCGA CCCTTCCGGT CGATGAGGAG GCGCTGCGCC GGCTCTATGA CCAGCGTCTG
GGCGAATTCG TGCAACCCGA GCGCCGGCTG GTCGAACGGC TGGCCTTCTC CACGCCCGAG
GCCGCGGCCG AGGCCCGCGC CCGGATCGAC GAGGGAACGC CGTTCGAGAC CCTCGTTTCC
GAACGGGGGC TCGAATTGAT CGACATCGAC ATGGGCGATG TCACCCGCGA CGAGCTGGGC
GCGGCAGCGG AGGCGGTCTT CGCCCTCACC GAGCCGGGGA TCGCGGGCCC GGTCGAGACC
GGGCTGGGCC CCGCCCTCTT CCGGGTGAAC GGGGTGATCG CGGCGCAGGA GACCCCGTTC
GAGGCGGTGC GCGACGACCT TCTCGCCGAA TATCAGCAGG ACGCCGCCGC CCGCGCCATC
TCGGGTCGCC GCGACCAGAT CGACGACCTG CTCGCCGCCG GTGCCACGCT GGAAGAGCTG
GGGACCGAGG CCGGGATGAA GATCGCCACC GTCGACTATG CGCCGGGGCT CGATTCGGAC
ATCGCGGGCT ACGAGGCGTT CCGCACCGCC GCCGATGCGC TGCAGCCGGA CGACTTCCCC
GAGACGGTCC AGCTCAACGA CGGCGGGCTT CTGGCCATGC GCCTCGACGA GGTGGTGCCG
CCGCAGCTGA AACCCTTCGA AGAGGTGCGC GACGAGGTGG CCGAGGCCGT GCGCGCCGAC
GCCCTCGACA AGGCGCTGGC CGCCCGTGCC GCCGAGATCG CCACGGCGGC CGAGGAAGGC
ACGGACCTCG GCAGCTTCGG TCCGGTCGAG GATCTGGGCC CGATGACGCG CGACGGCTTT
GTCGAGAACG TGCCCGAGAC CCTCGTCACC ACCGCCTTCG GGATGGAGGA GGGCGCGCTG
CGGGCCATCG ACGGGCCGGG CTTTGCCGGC GTCCTCCGGC TCGACACGGT CGAGCCCGCC
GCAGGCGACG ACGAGGCGGC CCGGGCGCTC AAGGCCTCGC TGTCGGCCCA GATCGAACAG
GCGCTGTCGC AGGATGCGCT TGCGCTCTTT TCCAACAGCC TGATGCAGGA GGCCGGCATC
ACGCTGAATG ACGCCGCGAT CTCGGCGGTT CAGGCCCAGT TCCAGTAA
|
|---|
| Protein sequence | MKRLARARLM RPSAPCPGAA QALDSRNRPN RKNAMSRLTS IEHHKPKKKG TQIVFWGLVA
LMAVGLGGFG VTNFGGGLST VGSVGDRDIT TADYARALQQ EMRALGAQIN QPVTMEMARA
FGLDQQVRRR LVTQAALSNE ADRVGLSVGD ARVAEEITGS DSFHGPSGQF DRETYRLVLR
QNNLSESEFE NGLREDISRS LLQGAVGGGF VAPAALVDTL HAYIAERRSF SLLRVQEANL
GAPLPEPTED ELQAWYEAHP ADFTAPERKR ITYAALLPQE VAPTLPVDEE ALRRLYDQRL
GEFVQPERRL VERLAFSTPE AAAEARARID EGTPFETLVS ERGLELIDID MGDVTRDELG
AAAEAVFALT EPGIAGPVET GLGPALFRVN GVIAAQETPF EAVRDDLLAE YQQDAAARAI
SGRRDQIDDL LAAGATLEEL GTEAGMKIAT VDYAPGLDSD IAGYEAFRTA ADALQPDDFP
ETVQLNDGGL LAMRLDEVVP PQLKPFEEVR DEVAEAVRAD ALDKALAARA AEIATAAEEG
TDLGSFGPVE DLGPMTRDGF VENVPETLVT TAFGMEEGAL RAIDGPGFAG VLRLDTVEPA
AGDDEAARAL KASLSAQIEQ ALSQDALALF SNSLMQEAGI TLNDAAISAV QAQFQ
|
|---|
| |