Gene Rsph17025_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3090 
Symbol 
ID5083177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3165017 
End bp3166120 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID640484662 
Producthypothetical protein 
Protein accessionYP_001169279 
Protein GI146279120 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.472406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA TCAAGAGTAT CCGTCACTGG CTGCGGACCC ATCCAACCGT CACGACAGAG 
CCGGCCACAC CGCCTGGGCG CGGTGCCCGC AGGGGGCCGG TGGATCATGT GATCCTGCTT
GACGGCACCT GTTCCTCGCT CGAGCCGGGC CACGAGACCA ACGTCGGACT GATCTTCAAA
CTGCTGCGCC AGGGACGTCG CTCGGTCCAT CGCACGATCT ATTACGAGCC CGGCCTGCAA
TGGTGCGGCT GGCTCAGGAT CGGCGACCTC GTGCAGGGCA GGGGGCTCAA CCGCCAGATC
CGCCGCGCCT ATGGCTATCT CGCTTCGCAC TACCAGCCGG GCGACCGGAT CTTCCTCTTC
GGCTATTCGC GCGGGGCCTA TGCCGTGCGC TCGCTGGCGG GCGTGATTGA CCGGGTCGGG
CTGCTGCGCC GCGAAGAGGC GACCGAGCGC AATGTCCAGC TGGCCTGGCG CCATTACGAG
CAGGGCAGCA TCCGACCCCA TGCCCGCGCC TTTTCGCGCC GCTACTGTCA TCCCCGGGTC
GAGATCGAGG TGGTGGGCAT CTTCGACACC GTGAAGGCCC TCGGGTTGCG GCTGCCGCTG
CTGTGGCGGC TGACCGAGGA CCGGCACGCC TTCCACAGCC ACAGGCTGGG CCGGACGGTG
CGCCACGGCT TTCATGCGCT GGCCATGGAC GAGACCCGCA CGGTCTTCGA GCCGGTGCTC
TGGGACTATC CCTACCACGG CCAGATAGTC GAGCAGGCCT GGTTCCGCGG TGGCCACGGT
GACATCGGCG GCCAGCTCAA CGGCGGTCGG CATGGCTCGC GCCTGCTGTC CAACATTCCG
TTGGTCTGGA TGCTCGAGCG TGCCGCCCAT TGTGGATTGC AACTTCCGGA GAGCTGGCGC
GCCGAGTTTC CCTGCGACGC CAGCGCCCCT ATGACGAGCC TCTATGCCGG CTGGGGCAAG
CTCTTCCTGT GGCGGCAGCG CCGGTCGCAG TTGTGCTGTC CGACGGAATA TCTCCACCCG
ACAGCCCTGC GGCCCTATTG TGCCCCCCGC AAGTGGCGGC TCCGGCTGGG CCCGGCCGAG
GCGGGAGAGC CGACGCAGGG ATAG
 
Protein sequence
MSLIKSIRHW LRTHPTVTTE PATPPGRGAR RGPVDHVILL DGTCSSLEPG HETNVGLIFK 
LLRQGRRSVH RTIYYEPGLQ WCGWLRIGDL VQGRGLNRQI RRAYGYLASH YQPGDRIFLF
GYSRGAYAVR SLAGVIDRVG LLRREEATER NVQLAWRHYE QGSIRPHARA FSRRYCHPRV
EIEVVGIFDT VKALGLRLPL LWRLTEDRHA FHSHRLGRTV RHGFHALAMD ETRTVFEPVL
WDYPYHGQIV EQAWFRGGHG DIGGQLNGGR HGSRLLSNIP LVWMLERAAH CGLQLPESWR
AEFPCDASAP MTSLYAGWGK LFLWRQRRSQ LCCPTEYLHP TALRPYCAPR KWRLRLGPAE
AGEPTQG