| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3068 |
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| Symbol | |
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| ID | 5083155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 3139210 |
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| End bp | 3140367 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640484640 |
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| Product | ribonuclease D |
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| Protein accession | YP_001169257 |
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| Protein GI | 146279098 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.439907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.252562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA TCACCACCAC CGAGGCGCTG GCCGCCTTCT GCGAGGCCGC CAAGGCCGCC
CCCTATGTCA CGATCGACAC GGAGTTCCTG CGCGAACGCA CCTACTGGTC CAAGCTCTGC
CTGATCCAGA TGGCGCTTCC CGGCAAGACT GGCGAGGCGG TTCTCGTCGA TCCGGTCGAG
GCGCCCGACA TGTCGCTCGA ACCGCTCTAC GACCTGTTCC GGCACGAGCC GACGGTCAAG
GTGTTCCACG CCGCCCGGCA GGATCTCGAG ATCTTCTTCG TCGAAGGCAG GGTTTTCCCC
ACGCCGCTGT TCGATACGCA GGTGGCCGCG ATGGTCTGCG GCTTTGGCGA GCAGGTGGGC
TACGAGACGC TGGTCAAGAA GATCGCGCGC GAGCAGCTGG ACAAGACTTC GCGCTTCACC
GACTGGTCGC GCCGGCCGCT GAGCGACGCG CAGAAGACCT ATGCCATTGC CGACGTGACG
CATCTGCGGG TGATCTACGA GTGGCTCTCG GCCCAGATCG AGAAGAACGG CCGGCAGCGG
TGGGTCGAGG AAGAGCTGGC GATCCTCACC GACCCCGAGA CCTACACCGT CCGCCCCGAG
GAAGCCTGGC TGCGGATCAA GACCCGCACC ACCTCGGGCC GCTTCCTTGC GGTGGTCAAG
GAGCTTGCGC GCTTCCGCGA GGAATATGCG CAGAAGAACA ACGTTCCGCG CTCGCGGGTG
CTCAAGGACG ATGCCCTTCT CGAGATCGCC TCGACGCGGC CGACGAATGT CGAGGAACTG
GGTCGCTCGC GGCTCTTGCT GCGCGAGGGC CGGCGGGGGG ATATCGCGGA CGGGATCCTC
GCTGCGGTCA AGGCGGGGAT GGAGGTGAAG GCCGAGGATC TTCCCAAGCC CGACCTGTCC
CGCGAGCAGC TTCAGGTGAA CCCGGCCTTG GCCGATCTGC TGCGGGTGCT GCTGAAGGCC
AAGTCGGAGA GCCTTGGTGT GGCGGCCCGG CTGATTGCCT CGGCCTCGGA TCTCGACGCC
ATCGCGGCGG GCGAGCGCGA CCTGCCGACG CTCAAGGGTT GGCGGCTGGA AGCCTTCGGC
GCCGATGCGC TGCGGCTCTG CCGGGGTGAG ATCGCGCTTT CGGCCAAGGG CAACGATGTG
CGGGTGGTCA AGCTCTGA
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| Protein sequence | MKTITTTEAL AAFCEAAKAA PYVTIDTEFL RERTYWSKLC LIQMALPGKT GEAVLVDPVE
APDMSLEPLY DLFRHEPTVK VFHAARQDLE IFFVEGRVFP TPLFDTQVAA MVCGFGEQVG
YETLVKKIAR EQLDKTSRFT DWSRRPLSDA QKTYAIADVT HLRVIYEWLS AQIEKNGRQR
WVEEELAILT DPETYTVRPE EAWLRIKTRT TSGRFLAVVK ELARFREEYA QKNNVPRSRV
LKDDALLEIA STRPTNVEEL GRSRLLLREG RRGDIADGIL AAVKAGMEVK AEDLPKPDLS
REQLQVNPAL ADLLRVLLKA KSESLGVAAR LIASASDLDA IAAGERDLPT LKGWRLEAFG
ADALRLCRGE IALSAKGNDV RVVKL
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