| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3066 |
|---|
| Symbol | |
|---|
| ID | 5085074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 3137482 |
|---|
| End bp | 3138528 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640484638 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_001169255 |
|---|
| Protein GI | 146279096 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.455526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.474133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC AGCAGAAGGG TCTGACCTAC GCAGACGCGG GCGTGGACAT CGACGCCGGC
AACGCGCTCG TCGAGCGGAT CAAGCCCGCC GCACGGCGCA CGGCGCGTCC CGGCACAGTC
TCGGGCCTGG GTGGGTTCGG CGCGCTCTTC GACCTGAAGG CCGCGGGCTA CCGTGACCCG
GTGCTGGTGG CGGCCACGGA CGGGGTGGGA ACCAAGCTGC GCATCGCCAT CGACACGGGC
GAAGTGGATA CGATCGGCAT CGACCTCGTG GCCATGTGCG TGAACGACCT CGTCTGCCAA
GGGGCAGAGC CGCTTTTCTT CCTCGACTAT TTCGCCACGG GCAAGCTCGA GCTGGATCAG
GCGGCCCGCA TCATCGAAGG CATTGCCGAA GGATGCGCGG CCTCGGGATG CGCTCTCATC
GGGGGGGAGA CCGCCGAGAT GCCGGGCATG TACCACAAGG GGGACTTCGA CCTTGCGGGC
TTCGCCGTGG GCGCAATGGA GCGTGGCGCG GACCTGCCGC GAGGGGTCGC GGCGGGCGAC
GTGCTGCTCG GGCTCGCATC GAACGGGGTC CATTCCAACG GCTATTCCTT CGTGCGCAAG
GTCGTCGAAC TCTCGGGGCT CGCCTGGGAT GCGCCGTCGC CGTTCGGCGG GGACAGCCTG
GGGCGGGCGC TGCTGGCGCC GACGCGGCTC TATGTGACGC AGGCTCTGGC CGCCGTCCGC
GCGGGCGGCG TCCATGCGCT GGCCCACATC ACGGGCGGCG GGCTCACCGA GAACCTGCCG
CGGGTGCTGC CCGAGGGGCT GGGCGCGCGC ATCGACCTCG GCGCGTGGGA CCTGCCGCCG
GTGTTCCGCT GGCTCGCCGA GACCGCCGCG ATGGCCGAGC CGGAGCTTCT CAAGACGTTC
AACTGCGGCA TCGGCATGAT TGTGGTGGTT GCCGCCGACC GCGCCGACGC GATCGCGGCC
CTGCTTGAGG CCGAGGGCGA GACCGTCACG CGCATCGGCG AAGTGATCCC CGGCCAGGGT
GTGAGCTACG ACGGCCGCCT GCTGTGA
|
|---|
| Protein sequence | MAEQQKGLTY ADAGVDIDAG NALVERIKPA ARRTARPGTV SGLGGFGALF DLKAAGYRDP
VLVAATDGVG TKLRIAIDTG EVDTIGIDLV AMCVNDLVCQ GAEPLFFLDY FATGKLELDQ
AARIIEGIAE GCAASGCALI GGETAEMPGM YHKGDFDLAG FAVGAMERGA DLPRGVAAGD
VLLGLASNGV HSNGYSFVRK VVELSGLAWD APSPFGGDSL GRALLAPTRL YVTQALAAVR
AGGVHALAHI TGGGLTENLP RVLPEGLGAR IDLGAWDLPP VFRWLAETAA MAEPELLKTF
NCGIGMIVVV AADRADAIAA LLEAEGETVT RIGEVIPGQG VSYDGRLL
|
|---|
| |